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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:17.1 nTPM
HPA:17.1 nTPM
GTEx:14.7 nTPM
FANTOM5:16.3 Scaled Tags Per Million
Pig:16.3 nTPM
Mouse:20.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037612
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.6
2621 Female, age 67, right hemisphere 21.3
2148 Female, age 91, left hemisphere 20.5
1911 Female, age 85, right hemisphere 15.1
2529 Female, age 94, left hemisphere 12.9
1898 Male, age 80, left hemisphere 12.1
1855 Male, age 76, left hemisphere 11.5
Dentate gyrus
nTPM: 17.1
1927 Female, age 91, both hemispheres 24.8
2530 Female, age 94, left hemisphere 21.1
2531 Female, age 67, both hemispheres 18.9
2528 Male, age 74, both hemispheres 14.0
2246 Female, age 85, both hemispheres 12.1
2010 Male, age 76, both hemispheres 11.9
Entorhinal gyrus
nTPM: 11.5
2613 Female, age 94, left hemisphere 20.4
1938 Female, age 85, left hemisphere 11.9
1787 Male, age 76, left hemisphere 10.1
2764 Male, age 80, right hemisphere 9.7
2117 Female, age 91, right hemisphere 8.5
2686 Male, age 75, right hemisphere 8.4
Hippocampus, CA1
nTPM: 14.7
2749 Male, age 80, left hemisphere 21.3
1873 Female, age 85, both hemispheres 19.7
2527 Male, age 74, both hemispheres 15.1
2045 Male, age 76, both hemispheres 11.3
2082 Female, age 91, right hemisphere 6.3
Hippocampus, CA2
nTPM: 14.3
1963 Male, age 80, left hemisphere 34.9
2437 Female, age 94, left hemisphere 13.6
1892 Male, age 76, both hemispheres 12.9
2249 Male, age 74, both hemispheres 10.8
1940 Female, age 85, left hemisphere 6.7
2113 Female, age 91, right hemisphere 6.7
Hippocampus, CA3
nTPM: 14.0
2861 Female, age 67, both hemispheres 23.5
2620 Female, age 94, left hemisphere 18.1
2137 Male, age 80, left hemisphere 15.4
1891 Female, age 85, both hemispheres 10.5
1867 Male, age 76, both hemispheres 8.2
2436 Male, age 74, both hemispheres 8.2
Parahippocampal cortex
nTPM: 8.1
2250 Female, age 67, right hemisphere 11.0
2245 Female, age 91, both hemispheres 9.9
2693 Female, age 94, both hemispheres 9.8
1990 Female, age 91, right hemisphere 9.7
1933 Female, age 85, both hemispheres 9.3
2692 Male, age 74, both hemispheres 9.0
2532 Female, age 72, left hemisphere 6.3
1850 Male, age 80, both hemispheres 5.9
2622 Female, age 67, right hemisphere 5.9
2018 Male, age 76, both hemispheres 4.6
Perirhinal gyrus
nTPM: 8.1
2521 Female, age 94, right hemisphere 10.9
1847 Female, age 91, left hemisphere 10.5
1841 Female, age 85, right hemisphere 7.0
2848 Male, age 76, right hemisphere 6.4
1794 Male, age 80, right hemisphere 5.8
Subiculum
nTPM: 8.5
1977 Female, age 85, both hemispheres 10.5
2619 Male, age 74, both hemispheres 9.5
2729 Female, age 91, right hemisphere 8.5
1901 Male, age 80, both hemispheres 8.2
2042 Male, age 76, both hemispheres 7.7
2438 Female, age 94, left hemisphere 6.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.7
Samples: 197

Max nTPM: 39.9
Min nTPM: 1.4
Std nTPM: 7.9
Median nTPM: 13.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 39.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 38.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 38.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 34.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 34.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 33.9
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 32.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 32.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 32.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 32.3
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 30.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.3
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 17.5
Min nTPM: 9.9
Sample A Female 17.5
Sample B Female 16.5
Sample C Male 9.9
Sample D Male 12.0
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.8
Min nTPM: 14.5
Sample A Female 17.6
Sample B Female 14.5
Sample C Male 17.8
Sample D Male 15.1
Subiculum
nTPM: 14.5
Samples: 4

Max nTPM: 19.0
Min nTPM: 11.8
Sample A Female 19.0
Sample B Female 14.8
Sample C Male 11.8
Sample D Male 12.4
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 17.9
Min nTPM: 10.8
Sample A Female 11.5
Sample B Female 10.8
Sample C Male 13.4
Sample D Male 17.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 22.4
Min nTPM: 16.5
Sample A Male 21.7
Sample B Male 21.1
Sample C Female 16.5
Sample D Female 22.4
Hippocampal formation
nTPM: 13.7
Samples: 4

Max nTPM: 17.2
Min nTPM: 11.6
Sample A Male 17.2
Sample B Male 14.1
Sample C Female 11.8
Sample D Female 11.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71496233 Antisense, RP_050913_04_A12, Mouse strain C57BL/6J (56 days, male) 0.2
77904879 Antisense, RP_070212_03_G12, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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