ABOUTMENU
HELP
NEWS
PHB2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:72.9 nTPM
HPA:72.9 nTPM
GTEx:63.4 nTPM
FANTOM5:72.9 Scaled Tags Per Million
Pig:30.2 nTPM
Mouse:85.8 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039874Antibody CAB014889Antibody CAB026335
Glial cells MediumMediumLow
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.9
Sample id Sample description nTPM
Hippocampus
nTPM: 72.5
1898 Male, age 80, left hemisphere 76.0
1855 Male, age 76, left hemisphere 73.9
2529 Female, age 94, left hemisphere 72.6
2621 Female, age 67, right hemisphere 72.5
2148 Female, age 91, left hemisphere 70.8
1911 Female, age 85, right hemisphere 69.5
Dentate gyrus
nTPM: 71.9
2530 Female, age 94, left hemisphere 74.9
2010 Male, age 76, both hemispheres 73.0
1927 Female, age 91, both hemispheres 72.4
2246 Female, age 85, both hemispheres 71.3
2528 Male, age 74, both hemispheres 70.1
2531 Female, age 67, both hemispheres 69.8
Entorhinal gyrus
nTPM: 72.2
2117 Female, age 91, right hemisphere 73.9
1938 Female, age 85, left hemisphere 72.4
2764 Male, age 80, right hemisphere 72.4
1787 Male, age 76, left hemisphere 72.3
2686 Male, age 75, right hemisphere 71.9
2613 Female, age 94, left hemisphere 70.5
Hippocampus, CA1
nTPM: 70.7
2527 Male, age 74, both hemispheres 72.0
2749 Male, age 80, left hemisphere 71.4
1873 Female, age 85, both hemispheres 71.1
2082 Female, age 91, right hemisphere 70.1
2045 Male, age 76, both hemispheres 68.9
Hippocampus, CA2
nTPM: 72.2
1892 Male, age 76, both hemispheres 75.8
1963 Male, age 80, left hemisphere 73.8
2437 Female, age 94, left hemisphere 73.7
2249 Male, age 74, both hemispheres 70.1
2113 Female, age 91, right hemisphere 69.9
1940 Female, age 85, left hemisphere 69.7
Hippocampus, CA3
nTPM: 71.3
2436 Male, age 74, both hemispheres 72.8
2861 Female, age 67, both hemispheres 72.6
1867 Male, age 76, both hemispheres 71.8
2137 Male, age 80, left hemisphere 70.3
1891 Female, age 85, both hemispheres 70.1
2620 Female, age 94, left hemisphere 70.0
Parahippocampal cortex
nTPM: 70.9
1850 Male, age 80, both hemispheres 73.5
2532 Female, age 72, left hemisphere 72.3
2692 Male, age 74, both hemispheres 71.6
2622 Female, age 67, right hemisphere 71.0
2245 Female, age 91, both hemispheres 70.6
1933 Female, age 85, both hemispheres 70.3
1990 Female, age 91, right hemisphere 70.3
2250 Female, age 67, right hemisphere 70.2
2018 Male, age 76, both hemispheres 69.7
2693 Female, age 94, both hemispheres 69.2
Perirhinal gyrus
nTPM: 72.9
1794 Male, age 80, right hemisphere 76.6
1847 Female, age 91, left hemisphere 74.0
1841 Female, age 85, right hemisphere 71.4
2521 Female, age 94, right hemisphere 71.3
2848 Male, age 76, right hemisphere 71.2
Subiculum
nTPM: 72.4
2438 Female, age 94, left hemisphere 76.9
1901 Male, age 80, both hemispheres 72.7
2619 Male, age 74, both hemispheres 72.7
1977 Female, age 85, both hemispheres 71.8
2042 Male, age 76, both hemispheres 70.7
2729 Female, age 91, right hemisphere 69.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.4
Samples: 197

Max nTPM: 118.0
Min nTPM: 26.2
Std nTPM: 9.6
Median nTPM: 63.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 118.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 89.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 86.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 85.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 83.5
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 82.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 81.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 81.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 79.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 79.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 78.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.9
FF:10153-102I9 76 years, female 75.7
FF:10169-103B7 60 years, female 70.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.2
Samples: 4

Max nTPM: 39.2
Min nTPM: 24.0
Sample A Female 39.2
Sample B Female 29.4
Sample C Male 28.2
Sample D Male 24.0
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 28.7
Min nTPM: 21.6
Sample A Female 28.7
Sample B Female 28.4
Sample C Male 25.4
Sample D Male 21.6
Subiculum
nTPM: 25.3
Samples: 4

Max nTPM: 35.2
Min nTPM: 21.3
Sample A Female 35.2
Sample B Female 22.2
Sample C Male 22.6
Sample D Male 21.3
Ventral hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 34.3
Min nTPM: 19.9
Sample A Female 29.4
Sample B Female 19.9
Sample C Male 34.3
Sample D Male 31.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.8
Samples: 4

Max nTPM: 87.9
Min nTPM: 78.2
Sample A Male 80.8
Sample B Male 84.3
Sample C Female 87.9
Sample D Female 78.2
Hippocampal formation
nTPM: 85.8
Samples: 4

Max nTPM: 94.9
Min nTPM: 77.5
Sample A Male 94.9
Sample B Male 77.5
Sample C Female 87.5
Sample D Female 83.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
69529250 Antisense, RP_050421_03_H01, Mouse strain C57BL/6J (56 days, male) 6.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.