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C5orf49
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.9 nTPM
HPA:15.9 nTPM
GTEx:17.8 nTPM
FANTOM5:26.3 Scaled Tags Per Million
Pig:22.5 nTPM
Mouse:18.6 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043759
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
1898 Male, age 80, left hemisphere 14.8
1911 Female, age 85, right hemisphere 14.6
2148 Female, age 91, left hemisphere 14.0
2529 Female, age 94, left hemisphere 13.8
1855 Male, age 76, left hemisphere 13.3
2621 Female, age 67, right hemisphere 12.9
Dentate gyrus
nTPM: 14.7
2010 Male, age 76, both hemispheres 16.5
2246 Female, age 85, both hemispheres 15.0
2530 Female, age 94, left hemisphere 15.0
2528 Male, age 74, both hemispheres 14.9
1927 Female, age 91, both hemispheres 14.3
2531 Female, age 67, both hemispheres 12.5
Entorhinal gyrus
nTPM: 13.7
1787 Male, age 76, left hemisphere 15.0
1938 Female, age 85, left hemisphere 14.0
2613 Female, age 94, left hemisphere 13.7
2764 Male, age 80, right hemisphere 13.7
2117 Female, age 91, right hemisphere 13.3
2686 Male, age 75, right hemisphere 12.4
Hippocampus, CA1
nTPM: 15.9
2082 Female, age 91, right hemisphere 20.5
2749 Male, age 80, left hemisphere 17.8
2527 Male, age 74, both hemispheres 14.9
1873 Female, age 85, both hemispheres 13.6
2045 Male, age 76, both hemispheres 12.7
Hippocampus, CA2
nTPM: 15.6
2249 Male, age 74, both hemispheres 21.3
2113 Female, age 91, right hemisphere 16.7
1940 Female, age 85, left hemisphere 16.2
2437 Female, age 94, left hemisphere 14.3
1892 Male, age 76, both hemispheres 13.2
1963 Male, age 80, left hemisphere 11.9
Hippocampus, CA3
nTPM: 15.5
2436 Male, age 74, both hemispheres 19.8
2137 Male, age 80, left hemisphere 19.1
1867 Male, age 76, both hemispheres 14.7
1891 Female, age 85, both hemispheres 13.6
2620 Female, age 94, left hemisphere 13.1
2861 Female, age 67, both hemispheres 12.6
Parahippocampal cortex
nTPM: 13.0
2245 Female, age 91, both hemispheres 14.0
1990 Female, age 91, right hemisphere 13.5
2018 Male, age 76, both hemispheres 13.4
1850 Male, age 80, both hemispheres 13.3
2250 Female, age 67, right hemisphere 13.2
1933 Female, age 85, both hemispheres 12.8
2692 Male, age 74, both hemispheres 12.8
2622 Female, age 67, right hemisphere 12.6
2532 Female, age 72, left hemisphere 12.3
2693 Female, age 94, both hemispheres 11.8
Perirhinal gyrus
nTPM: 13.5
1847 Female, age 91, left hemisphere 15.1
1794 Male, age 80, right hemisphere 14.1
1841 Female, age 85, right hemisphere 13.5
2848 Male, age 76, right hemisphere 12.3
2521 Female, age 94, right hemisphere 12.2
Subiculum
nTPM: 13.3
1901 Male, age 80, both hemispheres 15.0
2042 Male, age 76, both hemispheres 13.8
2619 Male, age 74, both hemispheres 13.2
1977 Female, age 85, both hemispheres 13.0
2729 Female, age 91, right hemisphere 13.0
2438 Female, age 94, left hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 90.3
Min nTPM: 4.7
Std nTPM: 11.7
Median nTPM: 14.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 90.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 69.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 52.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 52.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 50.3
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 48.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 48.4
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 46.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 43.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 43.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 43.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.3
FF:10169-103B7 60 years, female 27.2
FF:10153-102I9 76 years, female 25.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 27.6
Min nTPM: 17.0
Sample A Female 27.6
Sample B Female 24.3
Sample C Male 21.1
Sample D Male 17.0
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 28.3
Min nTPM: 13.1
Sample A Female 13.1
Sample B Female 28.3
Sample C Male 15.6
Sample D Male 15.0
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.7
Sample A Female 11.5
Sample B Female 11.0
Sample C Male 9.7
Sample D Male 9.9
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 29.4
Min nTPM: 12.6
Sample A Female 14.2
Sample B Female 12.6
Sample C Male 21.0
Sample D Male 29.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 21.0
Min nTPM: 16.1
Sample A Male 16.1
Sample B Male 21.0
Sample C Female 17.4
Sample D Female 19.8
Hippocampal formation
nTPM: 12.0
Samples: 4

Max nTPM: 17.3
Min nTPM: 9.8
Sample A Male 17.3
Sample B Male 10.1
Sample C Female 9.8
Sample D Female 10.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
69353511 Antisense, RP_050412_02_B03, Mouse strain C57BL/6J (56 days, male) 9.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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