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IFI30
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.0 nTPM
HPA:18.0 nTPM
GTEx:12.0 nTPM
FANTOM5:42.2 Scaled Tags Per Million
Pig:2.3 nTPM
Mouse:6.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026650
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.0
Sample id Sample description nTPM
Hippocampus
nTPM: 17.2
1855 Male, age 76, left hemisphere 19.7
1898 Male, age 80, left hemisphere 18.5
2621 Female, age 67, right hemisphere 17.3
2529 Female, age 94, left hemisphere 16.0
1911 Female, age 85, right hemisphere 15.9
2148 Female, age 91, left hemisphere 15.9
Dentate gyrus
nTPM: 16.9
2010 Male, age 76, both hemispheres 20.0
2531 Female, age 67, both hemispheres 17.2
2530 Female, age 94, left hemisphere 16.7
1927 Female, age 91, both hemispheres 16.1
2246 Female, age 85, both hemispheres 16.1
2528 Male, age 74, both hemispheres 15.2
Entorhinal gyrus
nTPM: 16.9
2117 Female, age 91, right hemisphere 20.4
1787 Male, age 76, left hemisphere 18.3
2686 Male, age 75, right hemisphere 16.0
2764 Male, age 80, right hemisphere 15.9
1938 Female, age 85, left hemisphere 15.5
2613 Female, age 94, left hemisphere 15.5
Hippocampus, CA1
nTPM: 16.2
2045 Male, age 76, both hemispheres 17.9
2082 Female, age 91, right hemisphere 16.8
2527 Male, age 74, both hemispheres 15.7
1873 Female, age 85, both hemispheres 15.3
2749 Male, age 80, left hemisphere 15.2
Hippocampus, CA2
nTPM: 18.0
1940 Female, age 85, left hemisphere 21.9
1892 Male, age 76, both hemispheres 18.6
2437 Female, age 94, left hemisphere 17.4
2113 Female, age 91, right hemisphere 16.8
2249 Male, age 74, both hemispheres 16.7
1963 Male, age 80, left hemisphere 16.3
Hippocampus, CA3
nTPM: 17.2
2436 Male, age 74, both hemispheres 21.0
1867 Male, age 76, both hemispheres 20.4
1891 Female, age 85, both hemispheres 15.7
2137 Male, age 80, left hemisphere 15.7
2861 Female, age 67, both hemispheres 15.5
2620 Female, age 94, left hemisphere 14.8
Parahippocampal cortex
nTPM: 16.5
2250 Female, age 67, right hemisphere 21.0
2018 Male, age 76, both hemispheres 19.3
1850 Male, age 80, both hemispheres 16.0
1990 Female, age 91, right hemisphere 16.0
2245 Female, age 91, both hemispheres 16.0
2693 Female, age 94, both hemispheres 15.7
2532 Female, age 72, left hemisphere 15.4
1933 Female, age 85, both hemispheres 15.3
2622 Female, age 67, right hemisphere 15.1
2692 Male, age 74, both hemispheres 14.8
Perirhinal gyrus
nTPM: 16.1
2521 Female, age 94, right hemisphere 16.7
2848 Male, age 76, right hemisphere 16.4
1794 Male, age 80, right hemisphere 16.1
1847 Female, age 91, left hemisphere 15.8
1841 Female, age 85, right hemisphere 15.6
Subiculum
nTPM: 17.6
2042 Male, age 76, both hemispheres 23.0
2729 Female, age 91, right hemisphere 17.7
1901 Male, age 80, both hemispheres 17.2
2438 Female, age 94, left hemisphere 16.7
2619 Male, age 74, both hemispheres 15.7
1977 Female, age 85, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.0
Samples: 197

Max nTPM: 436.9
Min nTPM: 0.0
Std nTPM: 33.5
Median nTPM: 5.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 436.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 103.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 64.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 62.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 58.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 54.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 52.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 51.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 50.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 48.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 46.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.2
FF:10169-103B7 60 years, female 53.3
FF:10153-102I9 76 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.9
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.4
Sample A Female 2.6
Sample B Female 1.4
Sample C Male 2.3
Sample D Male 1.4
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 2.5
Min nTPM: 1.5
Sample A Female 2.5
Sample B Female 1.6
Sample C Male 2.3
Sample D Male 1.5
Subiculum
nTPM: 2.1
Samples: 4

Max nTPM: 3.0
Min nTPM: 1.5
Sample A Female 3.0
Sample B Female 1.6
Sample C Male 1.5
Sample D Male 2.3
Ventral hippocampus
nTPM: 2.3
Samples: 4

Max nTPM: 3.3
Min nTPM: 1.4
Sample A Female 2.8
Sample B Female 1.4
Sample C Male 3.3
Sample D Male 1.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.9
Min nTPM: 4.7
Sample A Male 6.3
Sample B Male 4.7
Sample C Female 6.5
Sample D Female 7.9
Hippocampal formation
nTPM: 6.2
Samples: 4

Max nTPM: 7.7
Min nTPM: 4.5
Sample A Male 4.5
Sample B Male 5.9
Sample C Female 6.6
Sample D Female 7.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69014398 Antisense, RP_050310_01_A06, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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