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EXOSC6
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.6 nTPM
HPA:12.6 nTPM
GTEx:11.9 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Pig:3.1 nTPM
Mouse:0.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.6
Sample id Sample description nTPM
Hippocampus
nTPM: 9.9
2148 Female, age 91, left hemisphere 12.8
1855 Male, age 76, left hemisphere 10.6
2529 Female, age 94, left hemisphere 10.1
1898 Male, age 80, left hemisphere 9.9
2621 Female, age 67, right hemisphere 8.0
1911 Female, age 85, right hemisphere 7.9
Dentate gyrus
nTPM: 12.6
2530 Female, age 94, left hemisphere 16.5
2531 Female, age 67, both hemispheres 13.7
1927 Female, age 91, both hemispheres 13.2
2246 Female, age 85, both hemispheres 11.3
2528 Male, age 74, both hemispheres 11.3
2010 Male, age 76, both hemispheres 9.9
Entorhinal gyrus
nTPM: 12.0
2613 Female, age 94, left hemisphere 14.6
2764 Male, age 80, right hemisphere 14.5
1938 Female, age 85, left hemisphere 12.8
2686 Male, age 75, right hemisphere 10.8
1787 Male, age 76, left hemisphere 10.7
2117 Female, age 91, right hemisphere 8.7
Hippocampus, CA1
nTPM: 12.0
2749 Male, age 80, left hemisphere 16.4
2045 Male, age 76, both hemispheres 13.2
1873 Female, age 85, both hemispheres 12.4
2082 Female, age 91, right hemisphere 10.2
2527 Male, age 74, both hemispheres 7.6
Hippocampus, CA2
nTPM: 10.4
1963 Male, age 80, left hemisphere 14.2
2437 Female, age 94, left hemisphere 11.7
1892 Male, age 76, both hemispheres 10.4
2113 Female, age 91, right hemisphere 10.1
1940 Female, age 85, left hemisphere 8.7
2249 Male, age 74, both hemispheres 7.2
Hippocampus, CA3
nTPM: 11.5
2620 Female, age 94, left hemisphere 17.2
2861 Female, age 67, both hemispheres 16.7
2137 Male, age 80, left hemisphere 15.2
1891 Female, age 85, both hemispheres 8.5
1867 Male, age 76, both hemispheres 7.0
2436 Male, age 74, both hemispheres 4.4
Parahippocampal cortex
nTPM: 11.6
2622 Female, age 67, right hemisphere 14.0
2693 Female, age 94, both hemispheres 12.5
2532 Female, age 72, left hemisphere 12.3
1990 Female, age 91, right hemisphere 12.2
2692 Male, age 74, both hemispheres 11.8
1933 Female, age 85, both hemispheres 11.4
2250 Female, age 67, right hemisphere 11.1
1850 Male, age 80, both hemispheres 11.0
2245 Female, age 91, both hemispheres 10.5
2018 Male, age 76, both hemispheres 9.3
Perirhinal gyrus
nTPM: 11.7
2848 Male, age 76, right hemisphere 14.3
1841 Female, age 85, right hemisphere 12.6
2521 Female, age 94, right hemisphere 11.0
1794 Male, age 80, right hemisphere 10.8
1847 Female, age 91, left hemisphere 9.8
Subiculum
nTPM: 9.1
1977 Female, age 85, both hemispheres 12.5
2729 Female, age 91, right hemisphere 11.4
1901 Male, age 80, both hemispheres 8.6
2619 Male, age 74, both hemispheres 8.6
2438 Female, age 94, left hemisphere 7.3
2042 Male, age 76, both hemispheres 6.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 25.2
Min nTPM: 3.7
Std nTPM: 3.4
Median nTPM: 11.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 24.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 20.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 19.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 19.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 18.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 18.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 18.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 18.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.8
FF:10153-102I9 76 years, female 21.0
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.1
Samples: 4

Max nTPM: 4.5
Min nTPM: 1.7
Sample A Female 4.5
Sample B Female 3.1
Sample C Male 1.7
Sample D Male 3.2
Entorhinal cortex
nTPM: 2.7
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.7
Sample A Female 1.7
Sample B Female 3.0
Sample C Male 3.5
Sample D Male 2.6
Subiculum
nTPM: 2.7
Samples: 4

Max nTPM: 4.4
Min nTPM: 1.8
Sample A Female 4.4
Sample B Female 2.8
Sample C Male 1.9
Sample D Male 1.8
Ventral hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.5
Sample A Female 3.4
Sample B Female 2.7
Sample C Male 3.3
Sample D Male 2.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71496988 Antisense, RP_050913_04_H04, Mouse strain C57BL/6J (56 days, male) 0.4

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