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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:28.7 nTPM
HPA:28.7 nTPM
GTEx:44.4 nTPM
FANTOM5:124.0 Scaled Tags Per Million
Pig:14.5 nTPM
Mouse:24.5 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029185
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 28.4
2529 Female, age 94, left hemisphere 29.9
1898 Male, age 80, left hemisphere 29.4
1911 Female, age 85, right hemisphere 28.9
1855 Male, age 76, left hemisphere 28.2
2148 Female, age 91, left hemisphere 27.2
2621 Female, age 67, right hemisphere 26.6
Dentate gyrus
nTPM: 27.5
2010 Male, age 76, both hemispheres 28.7
1927 Female, age 91, both hemispheres 27.7
2246 Female, age 85, both hemispheres 27.7
2528 Male, age 74, both hemispheres 27.6
2530 Female, age 94, left hemisphere 27.5
2531 Female, age 67, both hemispheres 26.0
Entorhinal gyrus
nTPM: 28.0
1938 Female, age 85, left hemisphere 29.5
1787 Male, age 76, left hemisphere 29.2
2117 Female, age 91, right hemisphere 28.8
2686 Male, age 75, right hemisphere 27.5
2764 Male, age 80, right hemisphere 27.3
2613 Female, age 94, left hemisphere 25.4
Hippocampus, CA1
nTPM: 28.2
2749 Male, age 80, left hemisphere 29.6
2527 Male, age 74, both hemispheres 28.9
1873 Female, age 85, both hemispheres 28.6
2045 Male, age 76, both hemispheres 28.0
2082 Female, age 91, right hemisphere 26.0
Hippocampus, CA2
nTPM: 27.9
2249 Male, age 74, both hemispheres 28.5
1892 Male, age 76, both hemispheres 28.4
2113 Female, age 91, right hemisphere 28.0
1940 Female, age 85, left hemisphere 27.9
2437 Female, age 94, left hemisphere 27.6
1963 Male, age 80, left hemisphere 27.2
Hippocampus, CA3
nTPM: 28.1
2137 Male, age 80, left hemisphere 29.5
1867 Male, age 76, both hemispheres 28.9
1891 Female, age 85, both hemispheres 28.6
2436 Male, age 74, both hemispheres 28.4
2861 Female, age 67, both hemispheres 26.8
2620 Female, age 94, left hemisphere 26.6
Parahippocampal cortex
nTPM: 28.4
2245 Female, age 91, both hemispheres 29.1
2693 Female, age 94, both hemispheres 29.1
2018 Male, age 76, both hemispheres 28.9
2250 Female, age 67, right hemisphere 28.9
2692 Male, age 74, both hemispheres 28.8
1990 Female, age 91, right hemisphere 28.6
1850 Male, age 80, both hemispheres 28.3
2532 Female, age 72, left hemisphere 28.1
1933 Female, age 85, both hemispheres 27.8
2622 Female, age 67, right hemisphere 26.2
Perirhinal gyrus
nTPM: 28.2
1841 Female, age 85, right hemisphere 28.9
2848 Male, age 76, right hemisphere 28.2
1794 Male, age 80, right hemisphere 28.1
1847 Female, age 91, left hemisphere 28.0
2521 Female, age 94, right hemisphere 27.6
Subiculum
nTPM: 28.7
1901 Male, age 80, both hemispheres 29.8
2438 Female, age 94, left hemisphere 29.3
2042 Male, age 76, both hemispheres 29.1
1977 Female, age 85, both hemispheres 28.4
2619 Male, age 74, both hemispheres 28.1
2729 Female, age 91, right hemisphere 27.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.4
Samples: 197

Max nTPM: 92.1
Min nTPM: 28.1
Std nTPM: 8.5
Median nTPM: 43.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 92.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 84.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 68.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 65.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 62.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 61.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 61.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 59.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 58.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 56.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 56.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 124.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 124.0
FF:10153-102I9 76 years, female 124.6
FF:10169-103B7 60 years, female 123.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 13.5
Sample A Female 14.9
Sample B Female 14.5
Sample C Male 15.0
Sample D Male 13.5
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 16.4
Min nTPM: 13.3
Sample A Female 13.6
Sample B Female 16.4
Sample C Male 14.7
Sample D Male 13.3
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 14.5
Min nTPM: 13.2
Sample A Female 14.5
Sample B Female 13.8
Sample C Male 13.2
Sample D Male 13.9
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.6
Sample A Female 14.9
Sample B Female 13.7
Sample C Male 12.6
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 25.6
Min nTPM: 16.1
Sample A Male 25.6
Sample B Male 24.6
Sample C Female 22.8
Sample D Female 16.1
Hippocampal formation
nTPM: 24.5
Samples: 4

Max nTPM: 28.9
Min nTPM: 22.8
Sample A Male 28.9
Sample B Male 22.8
Sample C Female 23.0
Sample D Female 23.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69782306 Antisense, RP_050505_02_G01, Mouse strain C57BL/6J (56 days, male) 0.6

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