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RPS28
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:129.3 nTPM
HPA:129.3 nTPM
GTEx:202.7 nTPM
FANTOM5:3.8 Scaled Tags Per Million
Pig:482.6 nTPM
Mouse:418.6 nTPM
Allen mouse:3.7 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 129.3
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 127.5
2586 Male, age 75, left hemisphere 139.7
2666 Male, age 74, left hemisphere 129.1
1870 Female, age 42, unknown 129.0
2411 Female, age 72, unknown 127.6
1833 Male, age 53, unknown 126.5
2828 Female, age 72, unknown 126.2
1827 Male, age 72, unknown 125.2
2219 Male, age 76, both hemispheres 124.8
1830 Male, age 51, unknown 123.7
2019 Male, age 18, unknown 123.2
Dorsal raphe nucleus
nTPM: 127.3
1828 Male, age 53, unknown 128.5
2047 Male, age 72, unknown 127.9
2750 Male, age 76, both hemispheres 127.5
2298 Female, age 72, unknown 126.6
2016 Female, age 72, unknown 126.1
Inferior colliculus
nTPM: 126.3
1890 Male, age 53, unknown 129.3
1848 Female, age 42, unknown 127.2
2849 Male, age 72, unknown 124.6
2097 Female, age 72, unknown 124.0
Median raphe nucleus
nTPM: 124.7
2220 Male, age 76, midline 124.7
Pedunculopontine tegmental nucleus
nTPM: 126.1
2334 Male, age 80, both hemispheres 129.5
2338 Male, age 61, both hemispheres 124.7
1921 Female, age 85, both hemispheres 124.3
Periaquaductal grey, anterior
nTPM: 128.7
2502 Female, age 75, unknown 132.4
1795 Male, age 51, unknown 129.1
1947 Male, age 18, unknown 124.6
Periaquaductal grey, dorsal
nTPM: 124.2
1840 Male, age 53, unknown 126.5
2464 Female, age 72, unknown 124.8
1831 Male, age 72, unknown 124.5
2850 Male, age 76, both hemispheres 121.1
Periaquaductal grey, lateral
nTPM: 122.2
2053 Male, age 18, unknown 126.9
2140 Male, age 76, both hemispheres 121.7
2272 Male, age 74, both hemispheres 118.1
Pretectal area
nTPM: 123.7
2316 Male, age 76, right hemisphere 126.5
2825 Male, age 18, unknown 125.9
2007 Male, age 72, unknown 125.8
1817 Female, age 42, unknown 125.0
1816 Male, age 51, unknown 124.5
2224 Female, age 72, unknown 124.4
1815 Male, age 53, unknown 123.5
2407 Male, age 75, both hemispheres 122.9
1944 Female, age 72, unknown 121.8
2667 Female, age 75, unknown 120.8
2273 Male, age 74, both hemispheres 119.1
Red nucleus
nTPM: 129.3
2503 Female, age 72, unknown 135.4
2227 Male, age 72, unknown 133.7
2769 Male, age 72, unknown 132.6
2584 Male, age 75, left hemisphere 132.5
1821 Female, age 72, unknown 131.8
2588 Male, age 74, left hemisphere 128.5
1904 Male, age 53, unknown 128.1
1865 Male, age 51, unknown 127.9
2785 Male, age 18, unknown 126.9
2725 Female, age 75, unknown 126.5
1954 Female, age 42, unknown 124.2
2823 Male, age 76, right hemisphere 123.4
Substantia nigra
nTPM: 127.9
2699 Male, age 18, unknown 133.8
1851 Male, age 51, unknown 133.2
2590 Female, age 75, unknown 130.2
1916 Female, age 42, unknown 129.7
2665 Male, age 74, both hemispheres 128.8
2583 Male, age 75, right hemisphere 128.7
1889 Female, age 72, unknown 127.8
2409 Female, age 72, unknown 123.6
1941 Male, age 53, unknown 123.1
2241 Male, age 72, unknown 120.6
Superior colliculus
nTPM: 126.6
2587 Male, age 74, left hemisphere 129.0
2664 Male, age 75, both hemispheres 128.0
1995 Male, age 72, unknown 127.7
1839 Male, age 51, unknown 127.3
1796 Male, age 53, unknown 126.6
1913 Female, age 42, unknown 126.6
2668 Female, age 75, unknown 126.6
1895 Male, age 76, right hemisphere 126.4
2087 Female, age 72, unknown 124.0
2261 Male, age 18, unknown 123.5
Ventral tegmental area
nTPM: 127.6
1915 Female, age 42, unknown 130.9
2410 Female, age 72, unknown 128.8
2223 Female, age 72, unknown 128.0
2021 Male, age 53, unknown 127.0
2218 Male, age 76, both hemispheres 126.1
1942 Male, age 51, unknown 124.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 202.7
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 202.7
Samples: 139

Max nTPM: 504.6
Min nTPM: 70.4
Std nTPM: 76.5
Median nTPM: 192.1
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 504.6
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 475.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 465.0
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 417.5
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 395.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 350.7
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 321.4
GTEX-1EU9M-0011-R2b-SM-9QEH7 60-69 years, male 314.1
GTEX-1E1VI-0011-R2a-SM-9QEGS 50-59 years, male 312.9
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 305.1
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 299.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 3.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 3.8
FF:10158-103A5 76 years, female 3.8

MIDBRAIN - Pig RNA-seqi
Average nTPM 482.6
Pig sample Sample description nTPM
Midbrain
nTPM: 453.4
Samples: 4

Max nTPM: 602.3
Min nTPM: 311.6
Sample A Female 602.3
Sample B Female 511.3
Sample C Male 388.3
Sample D Male 311.6
Periaqueductal gray
nTPM: 375.5
Samples: 3

Max nTPM: 396.4
Min nTPM: 340.4
Sample B Female 396.4
Sample C Male 389.7
Sample D Male 340.4
Substantia nigra
nTPM: 482.6
Samples: 4

Max nTPM: 627.1
Min nTPM: 399.1
Sample A Female 627.1
Sample B Female 497.5
Sample C Male 406.7
Sample D Male 399.1
Superior colliculi
nTPM: 461.1
Samples: 4

Max nTPM: 584.0
Min nTPM: 400.9
Sample A Female 584.0
Sample B Female 436.6
Sample C Male 423.0
Sample D Male 400.9

MIDBRAIN - Mouse RNA-seqi
Average nTPM 418.6
Mouse sample Sample description nTPM
Midbrain
nTPM: 418.6
Samples: 4

Max nTPM: 537.1
Min nTPM: 358.8
Sample A Male 537.1
Sample B Male 358.8
Sample C Female 377.9
Sample D Female 400.4

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 3.7
69112407 Antisense, RP_050324_02_G08, Mouse strain C57BL/6J (56 days, male) 3.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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