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RBM14
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:40.2 nTPM
HPA:40.2 nTPM
GTEx:27.5 nTPM
FANTOM5:89.1 Scaled Tags Per Million
Pig:36.3 nTPM
Mouse:14.6 nTPM
Allen mouse:1.3 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA006628
Glial cells High
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 40.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 38.0
2289 Male, age 61, right hemisphere 41.9
1854 Male, age 80, left hemisphere 40.8
1781 Male, age 74, unknown 40.2
2290 Female, age 72, unknown 37.7
2288 Male, age 75, left hemisphere 37.2
2846 Female, age 79, unknown 37.1
1857 Female, age 85, left hemisphere 35.8
2481 Female, age 94, left hemisphere 33.2
Claustrum
nTPM: 40.2
2568 Male, age 61, both hemispheres 43.6
2292 Female, age 85, both hemispheres 42.8
2645 Female, age 72, unknown 42.7
2284 Female, age 91, both hemispheres 40.1
2392 Female, age 94, both hemispheres 39.9
2491 Male, age 75, both hemispheres 39.0
2196 Female, age 79, unknown 38.4
1956 Male, age 74, unknown 38.3
2198 Male, age 80, both hemispheres 36.8
Globus pallidus, externus
nTPM: 39.6
2646 Male, age 61, right hemisphere 42.2
2395 Male, age 75, both hemispheres 41.5
2567 Female, age 72, unknown 40.1
2772 Female, age 79, unknown 38.1
1996 Male, age 80, right hemisphere 36.1
Globus pallidus, internus
nTPM: 38.9
2566 Female, age 72, unknown 42.2
2111 Female, age 85, right hemisphere 42.1
2778 Female, age 91, both hemispheres 40.3
1818 Male, age 74, unknown 39.1
2037 Male, age 80, right hemisphere 38.5
2287 Male, age 75, right hemisphere 36.7
2483 Female, age 94, right hemisphere 33.6
Nucleus accumbens
nTPM: 38.1
2824 Male, age 61, right hemisphere 42.4
2732 Male, age 80, right hemisphere 38.9
1806 Female, age 85, left hemisphere 37.9
2391 Female, age 94, left hemisphere 37.9
2286 Male, age 75, left hemisphere 37.6
1783 Male, age 74, unknown 36.9
1856 Female, age 91, right hemisphere 36.8
2698 Female, age 72, unknown 36.1
Nucleus basalis of Meynert
nTPM: 38.9
2569 Male, age 61, both hemispheres 39.9
2393 Male, age 80, right hemisphere 38.9
2821 Male, age 75, both hemispheres 38.4
2484 Female, age 94, left hemisphere 38.2
Nucleus of the diagonal band
nTPM: 38.0
2029 Male, age 61, right hemisphere 41.9
1979 Male, age 74, unknown 39.4
2195 Female, age 85, both hemispheres 37.0
1812 Female, age 91, both hemispheres 35.8
2775 Male, age 80, right hemisphere 35.8
Olfactory tubercle
nTPM: 38.8
1998 Female, age 91, both hemispheres 41.3
2487 Female, age 94, left hemisphere 39.8
2856 Male, age 75, right hemisphere 37.7
1846 Male, age 80, right hemisphere 36.3
Putamen
nTPM: 39.3
1838 Male, age 80, right hemisphere 41.5
2466 Female, age 79, unknown 40.6
1829 Male, age 74, unknown 40.4
2489 Female, age 72, unknown 39.8
1937 Female, age 91, right hemisphere 39.5
2647 Male, age 75, left hemisphere 39.2
2482 Female, age 94, left hemisphere 34.1
Septal nuclei
nTPM: 38.3
2059 Female, age 85, both hemispheres 41.2
2009 Female, age 91, both hemispheres 39.2
2031 Female, age 72, unknown 38.6
2394 Male, age 61, left hemisphere 38.1
1960 Male, age 74, unknown 37.9
2199 Male, age 80, right hemisphere 36.8
2629 Female, age 94, right hemisphere 36.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 27.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 25.8
Samples: 246

Max nTPM: 70.9
Min nTPM: 10.1
Std nTPM: 7.7
Median nTPM: 25.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 70.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 53.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 46.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 44.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 42.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 42.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 42.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 42.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 42.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 41.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 27.5
Samples: 246

Max nTPM: 84.9
Min nTPM: 11.3
Std nTPM: 10.0
Median nTPM: 25.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 84.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 66.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 64.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 61.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 58.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 54.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 53.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 51.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 50.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 49.7
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Brain - Putamen (basal ganglia)
Average nTPM: 25.2
Samples: 205

Max nTPM: 54.8
Min nTPM: 11.3
Std nTPM: 6.8
Median nTPM: 24.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 54.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 49.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 46.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 44.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 42.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 41.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 41.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 39.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 38.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 38.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 37.7
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 89.1
FF:10164-103B2 76 years, female 89.1
Globus pallidus
Scaled Tags Per Million: 68.7
FF:10161-103A8 76 years, female 86.9
FF:10175-103C4 60 years, female 50.5
Nucleus accumbens
Scaled Tags Per Million: 79.1
FF:10037-101F1 23-56 years, mixed 79.1
Putamen
Scaled Tags Per Million: 66.0
FF:10176-103C5 60 years, female 66.0

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 36.3
Pig sample Sample description nTPM
Caudate
nTPM: 35.9
Samples: 4

Max nTPM: 39.4
Min nTPM: 31.8
Sample A Female 34.9
Sample B Female 39.4
Sample C Male 37.3
Sample D Male 31.8
Putamen
nTPM: 35.4
Samples: 4

Max nTPM: 37.2
Min nTPM: 33.1
Sample A Female 35.8
Sample B Female 33.1
Sample C Male 35.6
Sample D Male 37.2
Septum
nTPM: 35.9
Samples: 4

Max nTPM: 38.4
Min nTPM: 30.9
Sample A Female 36.3
Sample B Female 38.4
Sample C Male 30.9
Sample D Male 38.1
Ventral pallidum
nTPM: 36.3
Samples: 4

Max nTPM: 40.0
Min nTPM: 33.5
Sample A Female 33.6
Sample B Female 40.0
Sample C Male 33.5
Sample D Male 37.9

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 14.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 14.1
Samples: 4

Max nTPM: 15.1
Min nTPM: 12.9
Sample A Male 13.7
Sample B Male 15.1
Sample C Female 12.9
Sample D Female 14.6
Septum
nTPM: 14.4
Samples: 4

Max nTPM: 14.8
Min nTPM: 13.8
Sample A Male 13.8
Sample B Male 14.3
Sample C Female 14.8
Sample D Female 14.5
Ventral forebrain
nTPM: 14.7
Samples: 4

Max nTPM: 17.3
Min nTPM: 12.8
Sample A Male 12.8
Sample B Male 14.1
Sample C Female 17.3
Sample D Female 14.4

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.3
100146062 Antisense, RP_110421_02_F11, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 1.1
100146062 Antisense, RP_110421_02_F11, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.