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APOBEC3G
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:3.2 nTPM
HPA:3.2 nTPM
GTEx:2.3 nTPM
FANTOM5:0.7 Scaled Tags Per Million

CAUDATE - Antibody stainingi
Antibody HPA001812
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 3.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 3.0
2481 Female, age 94, left hemisphere 3.3
2846 Female, age 79, unknown 3.3
1781 Male, age 74, unknown 3.0
1854 Male, age 80, left hemisphere 3.0
1857 Female, age 85, left hemisphere 2.9
2289 Male, age 61, right hemisphere 2.9
2290 Female, age 72, unknown 2.8
2288 Male, age 75, left hemisphere 2.7
Claustrum
nTPM: 2.7
2196 Female, age 79, unknown 2.8
2292 Female, age 85, both hemispheres 2.7
2392 Female, age 94, both hemispheres 2.7
2491 Male, age 75, both hemispheres 2.7
1956 Male, age 74, unknown 2.6
2198 Male, age 80, both hemispheres 2.6
2284 Female, age 91, both hemispheres 2.6
2568 Male, age 61, both hemispheres 2.6
2645 Female, age 72, unknown 2.6
Globus pallidus, externus
nTPM: 3.2
1996 Male, age 80, right hemisphere 3.5
2772 Female, age 79, unknown 3.5
2395 Male, age 75, both hemispheres 3.1
2646 Male, age 61, right hemisphere 3.1
2567 Female, age 72, unknown 2.9
Globus pallidus, internus
nTPM: 3.2
1818 Male, age 74, unknown 3.4
2037 Male, age 80, right hemisphere 3.3
2483 Female, age 94, right hemisphere 3.2
2566 Female, age 72, unknown 3.2
2778 Female, age 91, both hemispheres 3.2
2111 Female, age 85, right hemisphere 2.9
2287 Male, age 75, right hemisphere 2.9
Nucleus accumbens
nTPM: 2.8
2732 Male, age 80, right hemisphere 3.0
2391 Female, age 94, left hemisphere 2.9
2698 Female, age 72, unknown 2.9
1783 Male, age 74, unknown 2.8
1806 Female, age 85, left hemisphere 2.8
1856 Female, age 91, right hemisphere 2.7
2286 Male, age 75, left hemisphere 2.7
2824 Male, age 61, right hemisphere 2.6
Nucleus basalis of Meynert
nTPM: 3.0
2569 Male, age 61, both hemispheres 3.1
2393 Male, age 80, right hemisphere 3.0
2484 Female, age 94, left hemisphere 3.0
2821 Male, age 75, both hemispheres 2.9
Nucleus of the diagonal band
nTPM: 2.6
1812 Female, age 91, both hemispheres 3.0
1979 Male, age 74, unknown 2.6
2029 Male, age 61, right hemisphere 2.6
2775 Male, age 80, right hemisphere 2.6
2195 Female, age 85, both hemispheres 2.4
Olfactory tubercle
nTPM: 2.6
1846 Male, age 80, right hemisphere 2.8
2856 Male, age 75, right hemisphere 2.7
1998 Female, age 91, both hemispheres 2.5
2487 Female, age 94, left hemisphere 2.5
Putamen
nTPM: 2.8
2482 Female, age 94, left hemisphere 3.1
2466 Female, age 79, unknown 2.9
2489 Female, age 72, unknown 2.9
1838 Male, age 80, right hemisphere 2.8
1937 Female, age 91, right hemisphere 2.8
1829 Male, age 74, unknown 2.7
2647 Male, age 75, left hemisphere 2.7
Septal nuclei
nTPM: 2.8
2199 Male, age 80, right hemisphere 3.1
2009 Female, age 91, both hemispheres 3.0
2394 Male, age 61, left hemisphere 2.9
2629 Female, age 94, right hemisphere 2.7
1960 Male, age 74, unknown 2.6
2031 Female, age 72, unknown 2.6
2059 Female, age 85, both hemispheres 2.6

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 2.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2.3
Samples: 246

Max nTPM: 7.6
Min nTPM: 0.6
Std nTPM: 1.2
Median nTPM: 1.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 7.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 7.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 6.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 6.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 6.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 5.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 5.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 5.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 5.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 4.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1.9
Samples: 246

Max nTPM: 7.2
Min nTPM: 0.3
Std nTPM: 1.1
Median nTPM: 1.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 7.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 7.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 6.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 6.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 6.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 5.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 5.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 5.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 4.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 4.3
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Brain - Putamen (basal ganglia)
Average nTPM: 2.3
Samples: 205

Max nTPM: 7.1
Min nTPM: 0.7
Std nTPM: 1.2
Median nTPM: 1.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 6.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 6.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 5.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 5.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 5.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 5.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 5.0
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 0.1
FF:10164-103B2 76 years, female 0.1
Globus pallidus
Scaled Tags Per Million: 0.7
FF:10175-103C4 60 years, female 0.7
FF:10161-103A8 76 years, female 0.7
Nucleus accumbens
Scaled Tags Per Million: 0.5
FF:10037-101F1 23-56 years, mixed 0.5
Putamen
Scaled Tags Per Million: 0.2
FF:10176-103C5 60 years, female 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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