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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.6 nTPM
HPA:19.6 nTPM
GTEx:16.0 nTPM
FANTOM5:35.0 Scaled Tags Per Million
Pig:21.0 nTPM
Mouse:26.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059549
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 18.8
1855 Male, age 76, left hemisphere 19.8
1898 Male, age 80, left hemisphere 19.3
1911 Female, age 85, right hemisphere 18.7
2148 Female, age 91, left hemisphere 18.7
2621 Female, age 67, right hemisphere 18.3
2529 Female, age 94, left hemisphere 18.2
Dentate gyrus
nTPM: 19.2
2530 Female, age 94, left hemisphere 21.8
2010 Male, age 76, both hemispheres 20.2
2531 Female, age 67, both hemispheres 20.1
2246 Female, age 85, both hemispheres 18.4
2528 Male, age 74, both hemispheres 17.7
1927 Female, age 91, both hemispheres 17.2
Entorhinal gyrus
nTPM: 18.5
1787 Male, age 76, left hemisphere 19.7
2117 Female, age 91, right hemisphere 19.3
2764 Male, age 80, right hemisphere 19.3
2686 Male, age 75, right hemisphere 18.1
2613 Female, age 94, left hemisphere 17.7
1938 Female, age 85, left hemisphere 17.0
Hippocampus, CA1
nTPM: 19.6
2749 Male, age 80, left hemisphere 23.0
2045 Male, age 76, both hemispheres 20.6
1873 Female, age 85, both hemispheres 19.1
2082 Female, age 91, right hemisphere 18.1
2527 Male, age 74, both hemispheres 17.3
Hippocampus, CA2
nTPM: 17.9
1892 Male, age 76, both hemispheres 19.1
2437 Female, age 94, left hemisphere 18.8
1963 Male, age 80, left hemisphere 17.8
1940 Female, age 85, left hemisphere 17.5
2113 Female, age 91, right hemisphere 17.5
2249 Male, age 74, both hemispheres 16.6
Hippocampus, CA3
nTPM: 19.5
2620 Female, age 94, left hemisphere 21.9
2137 Male, age 80, left hemisphere 20.7
1867 Male, age 76, both hemispheres 19.3
2861 Female, age 67, both hemispheres 18.9
1891 Female, age 85, both hemispheres 18.3
2436 Male, age 74, both hemispheres 17.8
Parahippocampal cortex
nTPM: 18.6
2532 Female, age 72, left hemisphere 20.5
2692 Male, age 74, both hemispheres 19.5
2693 Female, age 94, both hemispheres 19.2
2018 Male, age 76, both hemispheres 19.1
2622 Female, age 67, right hemisphere 18.8
1990 Female, age 91, right hemisphere 18.2
1933 Female, age 85, both hemispheres 18.1
1850 Male, age 80, both hemispheres 17.8
2250 Female, age 67, right hemisphere 17.7
2245 Female, age 91, both hemispheres 16.9
Perirhinal gyrus
nTPM: 17.7
2521 Female, age 94, right hemisphere 18.6
2848 Male, age 76, right hemisphere 18.4
1794 Male, age 80, right hemisphere 17.4
1847 Female, age 91, left hemisphere 17.1
1841 Female, age 85, right hemisphere 16.8
Subiculum
nTPM: 19.4
2438 Female, age 94, left hemisphere 21.3
1901 Male, age 80, both hemispheres 20.3
2042 Male, age 76, both hemispheres 19.6
1977 Female, age 85, both hemispheres 18.8
2729 Female, age 91, right hemisphere 18.3
2619 Male, age 74, both hemispheres 18.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.0
Samples: 197

Max nTPM: 48.3
Min nTPM: 4.2
Std nTPM: 7.9
Median nTPM: 13.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 48.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 47.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 41.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 41.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 38.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 36.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 36.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 36.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 33.2
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 31.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 31.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.0
FF:10153-102I9 76 years, female 48.2
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 26.9
Min nTPM: 14.8
Sample A Female 26.9
Sample B Female 19.2
Sample C Male 22.9
Sample D Male 14.8
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.4
Min nTPM: 14.2
Sample A Female 14.7
Sample B Female 17.4
Sample C Male 15.9
Sample D Male 14.2
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 15.8
Min nTPM: 12.3
Sample A Female 15.8
Sample B Female 14.1
Sample C Male 12.3
Sample D Male 15.2
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 19.2
Min nTPM: 11.8
Sample A Female 19.2
Sample B Female 11.8
Sample C Male 18.1
Sample D Male 18.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 25.5
Min nTPM: 21.4
Sample A Male 25.5
Sample B Male 21.4
Sample C Female 21.4
Sample D Female 22.2
Hippocampal formation
nTPM: 26.5
Samples: 4

Max nTPM: 32.6
Min nTPM: 22.3
Sample A Male 22.3
Sample B Male 25.7
Sample C Female 32.6
Sample D Female 25.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69735986 Antisense, RP_050503_03_H08, Mouse strain C57BL/6J (56 days, male) 0.1

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