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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:11.3 nTPM
HPA:11.3 nTPM
GTEx:13.1 nTPM
FANTOM5:54.2 Scaled Tags Per Million
Pig:25.4 nTPM
Mouse:30.3 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007216
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.3
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1898 Male, age 80, left hemisphere 12.0
1855 Male, age 76, left hemisphere 10.5
1911 Female, age 85, right hemisphere 10.2
2621 Female, age 67, right hemisphere 10.1
2529 Female, age 94, left hemisphere 9.8
2148 Female, age 91, left hemisphere 9.6
Dentate gyrus
nTPM: 9.8
2010 Male, age 76, both hemispheres 10.8
2246 Female, age 85, both hemispheres 10.2
1927 Female, age 91, both hemispheres 10.1
2530 Female, age 94, left hemisphere 9.5
2531 Female, age 67, both hemispheres 9.2
2528 Male, age 74, both hemispheres 9.1
Entorhinal gyrus
nTPM: 10.6
1787 Male, age 76, left hemisphere 12.0
1938 Female, age 85, left hemisphere 12.0
2764 Male, age 80, right hemisphere 10.6
2117 Female, age 91, right hemisphere 9.9
2686 Male, age 75, right hemisphere 9.8
2613 Female, age 94, left hemisphere 9.0
Hippocampus, CA1
nTPM: 11.2
2749 Male, age 80, left hemisphere 14.6
2045 Male, age 76, both hemispheres 11.2
1873 Female, age 85, both hemispheres 11.1
2527 Male, age 74, both hemispheres 10.4
2082 Female, age 91, right hemisphere 8.7
Hippocampus, CA2
nTPM: 10.5
1963 Male, age 80, left hemisphere 13.0
1892 Male, age 76, both hemispheres 11.9
2437 Female, age 94, left hemisphere 10.0
2113 Female, age 91, right hemisphere 9.7
2249 Male, age 74, both hemispheres 9.6
1940 Female, age 85, left hemisphere 9.1
Hippocampus, CA3
nTPM: 10.5
2137 Male, age 80, left hemisphere 13.4
1867 Male, age 76, both hemispheres 11.5
2436 Male, age 74, both hemispheres 10.5
1891 Female, age 85, both hemispheres 10.1
2861 Female, age 67, both hemispheres 8.8
2620 Female, age 94, left hemisphere 8.6
Parahippocampal cortex
nTPM: 10.5
1933 Female, age 85, both hemispheres 11.8
1850 Male, age 80, both hemispheres 11.7
2250 Female, age 67, right hemisphere 11.4
2245 Female, age 91, both hemispheres 10.5
2532 Female, age 72, left hemisphere 10.4
1990 Female, age 91, right hemisphere 10.3
2693 Female, age 94, both hemispheres 9.8
2018 Male, age 76, both hemispheres 9.7
2692 Male, age 74, both hemispheres 9.6
2622 Female, age 67, right hemisphere 9.4
Perirhinal gyrus
nTPM: 11.3
1794 Male, age 80, right hemisphere 12.3
1847 Female, age 91, left hemisphere 11.3
2521 Female, age 94, right hemisphere 11.2
1841 Female, age 85, right hemisphere 11.0
2848 Male, age 76, right hemisphere 10.7
Subiculum
nTPM: 10.2
1977 Female, age 85, both hemispheres 11.8
1901 Male, age 80, both hemispheres 11.3
2619 Male, age 74, both hemispheres 10.3
2438 Female, age 94, left hemisphere 9.8
2042 Male, age 76, both hemispheres 9.4
2729 Female, age 91, right hemisphere 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.1
Samples: 197

Max nTPM: 22.3
Min nTPM: 5.2
Std nTPM: 2.6
Median nTPM: 13.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 22.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 21.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 19.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 18.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 18.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 18.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 18.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 17.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 17.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 17.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 17.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.2
FF:10169-103B7 60 years, female 61.7
FF:10153-102I9 76 years, female 46.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.4
Samples: 4

Max nTPM: 29.3
Min nTPM: 22.8
Sample A Female 29.3
Sample B Female 25.5
Sample C Male 22.8
Sample D Male 23.9
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 26.0
Min nTPM: 22.2
Sample A Female 26.0
Sample B Female 24.9
Sample C Male 24.8
Sample D Male 22.2
Subiculum
nTPM: 24.6
Samples: 4

Max nTPM: 31.9
Min nTPM: 21.7
Sample A Female 31.9
Sample B Female 22.4
Sample C Male 22.5
Sample D Male 21.7
Ventral hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 24.2
Min nTPM: 21.1
Sample A Female 23.7
Sample B Female 21.1
Sample C Male 24.2
Sample D Male 23.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.4
Samples: 4

Max nTPM: 32.0
Min nTPM: 29.3
Sample A Male 30.6
Sample B Male 32.0
Sample C Female 29.5
Sample D Female 29.3
Hippocampal formation
nTPM: 28.9
Samples: 4

Max nTPM: 31.5
Min nTPM: 25.4
Sample A Male 30.9
Sample B Male 31.5
Sample C Female 27.9
Sample D Female 25.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
76097713 Antisense, RP_060626_01_C09, Mouse strain C57BL/6J (56 days, male) 1.7

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