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ARPC4
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:150.5 nTPM
HPA:150.5 nTPM
GTEx:86.8 nTPM
FANTOM5:94.7 Scaled Tags Per Million
Pig:79.0 nTPM
Mouse:321.9 nTPM
Allen mouse:16.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 150.5
Sample id Sample description nTPM
Hippocampus
nTPM: 140.2
1898 Male, age 80, left hemisphere 150.8
1855 Male, age 76, left hemisphere 149.2
2621 Female, age 67, right hemisphere 143.9
2148 Female, age 91, left hemisphere 134.9
1911 Female, age 85, right hemisphere 133.3
2529 Female, age 94, left hemisphere 129.0
Dentate gyrus
nTPM: 142.4
2530 Female, age 94, left hemisphere 151.6
2010 Male, age 76, both hemispheres 150.6
1927 Female, age 91, both hemispheres 146.9
2528 Male, age 74, both hemispheres 136.7
2531 Female, age 67, both hemispheres 134.7
2246 Female, age 85, both hemispheres 133.7
Entorhinal gyrus
nTPM: 137.4
1938 Female, age 85, left hemisphere 140.8
2613 Female, age 94, left hemisphere 140.6
2764 Male, age 80, right hemisphere 139.5
1787 Male, age 76, left hemisphere 138.9
2117 Female, age 91, right hemisphere 133.2
2686 Male, age 75, right hemisphere 131.6
Hippocampus, CA1
nTPM: 150.5
2749 Male, age 80, left hemisphere 198.1
1873 Female, age 85, both hemispheres 148.7
2045 Male, age 76, both hemispheres 145.2
2527 Male, age 74, both hemispheres 131.4
2082 Female, age 91, right hemisphere 129.2
Hippocampus, CA2
nTPM: 142.6
1963 Male, age 80, left hemisphere 162.9
1892 Male, age 76, both hemispheres 158.6
2437 Female, age 94, left hemisphere 137.5
2249 Male, age 74, both hemispheres 135.9
1940 Female, age 85, left hemisphere 131.8
2113 Female, age 91, right hemisphere 128.9
Hippocampus, CA3
nTPM: 143.2
2137 Male, age 80, left hemisphere 168.2
1867 Male, age 76, both hemispheres 151.7
2861 Female, age 67, both hemispheres 142.6
2620 Female, age 94, left hemisphere 136.1
2436 Male, age 74, both hemispheres 131.1
1891 Female, age 85, both hemispheres 129.5
Parahippocampal cortex
nTPM: 133.4
1933 Female, age 85, both hemispheres 137.1
2245 Female, age 91, both hemispheres 136.6
2250 Female, age 67, right hemisphere 135.6
2018 Male, age 76, both hemispheres 135.3
2532 Female, age 72, left hemisphere 134.2
1850 Male, age 80, both hemispheres 133.8
1990 Female, age 91, right hemisphere 133.4
2692 Male, age 74, both hemispheres 131.5
2693 Female, age 94, both hemispheres 128.8
2622 Female, age 67, right hemisphere 127.9
Perirhinal gyrus
nTPM: 138.3
1847 Female, age 91, left hemisphere 143.7
1794 Male, age 80, right hemisphere 138.6
1841 Female, age 85, right hemisphere 137.8
2521 Female, age 94, right hemisphere 136.1
2848 Male, age 76, right hemisphere 135.4
Subiculum
nTPM: 134.1
1901 Male, age 80, both hemispheres 140.9
2042 Male, age 76, both hemispheres 139.6
1977 Female, age 85, both hemispheres 136.9
2729 Female, age 91, right hemisphere 133.5
2619 Male, age 74, both hemispheres 128.7
2438 Female, age 94, left hemisphere 125.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 86.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.8
Samples: 197

Max nTPM: 186.4
Min nTPM: 41.0
Std nTPM: 30.5
Median nTPM: 79.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 186.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 181.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 179.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 171.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 165.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 155.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 152.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 151.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 151.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 150.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 150.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.7
FF:10169-103B7 60 years, female 138.1
FF:10153-102I9 76 years, female 51.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.0
Samples: 4

Max nTPM: 105.4
Min nTPM: 58.1
Sample A Female 105.4
Sample B Female 85.0
Sample C Male 67.5
Sample D Male 58.1
Entorhinal cortex
nTPM: 64.3
Samples: 4

Max nTPM: 75.8
Min nTPM: 49.8
Sample A Female 66.6
Sample B Female 75.8
Sample C Male 64.9
Sample D Male 49.8
Subiculum
nTPM: 60.9
Samples: 4

Max nTPM: 77.9
Min nTPM: 51.7
Sample A Female 77.9
Sample B Female 61.6
Sample C Male 52.3
Sample D Male 51.7
Ventral hippocampus
nTPM: 68.0
Samples: 4

Max nTPM: 74.3
Min nTPM: 51.8
Sample A Female 73.3
Sample B Female 51.8
Sample C Male 72.7
Sample D Male 74.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 321.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 249.9
Samples: 4

Max nTPM: 269.6
Min nTPM: 233.4
Sample A Male 238.8
Sample B Male 233.4
Sample C Female 257.6
Sample D Female 269.6
Hippocampal formation
nTPM: 321.9
Samples: 4

Max nTPM: 360.6
Min nTPM: 294.1
Sample A Male 360.6
Sample B Male 294.1
Sample C Female 334.2
Sample D Female 298.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.4
69013768 Antisense, RP_050309_02_H12, Mouse strain C57BL/6J (56 days, male) 16.4

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