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C22orf39
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.8 nTPM
HPA:34.8 nTPM
GTEx:47.4 nTPM
FANTOM5:37.9 Scaled Tags Per Million
Mouse:13.2 nTPM
Allen mouse:1.3 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 34.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 33.7
2586 Male, age 75, left hemisphere 36.5
1827 Male, age 72, unknown 34.3
2666 Male, age 74, left hemisphere 34.2
2828 Female, age 72, unknown 34.2
2411 Female, age 72, unknown 33.7
2219 Male, age 76, both hemispheres 33.5
1830 Male, age 51, unknown 32.9
2019 Male, age 18, unknown 32.9
1870 Female, age 42, unknown 32.4
1833 Male, age 53, unknown 32.2
Dorsal raphe nucleus
nTPM: 32.1
1828 Male, age 53, unknown 33.0
2047 Male, age 72, unknown 32.3
2016 Female, age 72, unknown 31.8
2750 Male, age 76, both hemispheres 31.7
2298 Female, age 72, unknown 31.5
Inferior colliculus
nTPM: 33.0
1890 Male, age 53, unknown 34.1
2097 Female, age 72, unknown 33.0
1848 Female, age 42, unknown 32.6
2849 Male, age 72, unknown 32.5
Median raphe nucleus
nTPM: 32.1
2220 Male, age 76, midline 32.1
Pedunculopontine tegmental nucleus
nTPM: 32.2
1921 Female, age 85, both hemispheres 33.2
2334 Male, age 80, both hemispheres 32.0
2338 Male, age 61, both hemispheres 31.5
Periaquaductal grey, anterior
nTPM: 34.8
2502 Female, age 75, unknown 35.7
1947 Male, age 18, unknown 34.5
1795 Male, age 51, unknown 34.1
Periaquaductal grey, dorsal
nTPM: 31.7
2464 Female, age 72, unknown 32.9
1831 Male, age 72, unknown 31.8
1840 Male, age 53, unknown 31.3
2850 Male, age 76, both hemispheres 30.8
Periaquaductal grey, lateral
nTPM: 31.6
2053 Male, age 18, unknown 32.6
2140 Male, age 76, both hemispheres 31.5
2272 Male, age 74, both hemispheres 30.6
Pretectal area
nTPM: 33.9
1816 Male, age 51, unknown 38.2
1944 Female, age 72, unknown 36.1
2007 Male, age 72, unknown 35.9
1817 Female, age 42, unknown 35.3
1815 Male, age 53, unknown 33.9
2407 Male, age 75, both hemispheres 33.7
2667 Female, age 75, unknown 32.9
2825 Male, age 18, unknown 32.3
2224 Female, age 72, unknown 32.0
2316 Male, age 76, right hemisphere 32.0
2273 Male, age 74, both hemispheres 30.8
Red nucleus
nTPM: 34.1
2588 Male, age 74, left hemisphere 35.8
2503 Female, age 72, unknown 34.5
2227 Male, age 72, unknown 34.2
2823 Male, age 76, right hemisphere 34.2
2769 Male, age 72, unknown 34.1
1954 Female, age 42, unknown 34.0
1865 Male, age 51, unknown 33.7
2584 Male, age 75, left hemisphere 33.7
2785 Male, age 18, unknown 33.7
1821 Female, age 72, unknown 33.6
2725 Female, age 75, unknown 33.6
1904 Male, age 53, unknown 33.4
Substantia nigra
nTPM: 34.8
1916 Female, age 42, unknown 36.1
1941 Male, age 53, unknown 36.1
2409 Female, age 72, unknown 35.4
2665 Male, age 74, both hemispheres 35.1
2590 Female, age 75, unknown 34.9
1851 Male, age 51, unknown 34.7
2699 Male, age 18, unknown 34.5
2583 Male, age 75, right hemisphere 33.9
1889 Female, age 72, unknown 33.7
2241 Male, age 72, unknown 33.1
Superior colliculus
nTPM: 33.9
2087 Female, age 72, unknown 36.9
2261 Male, age 18, unknown 35.9
2664 Male, age 75, both hemispheres 34.6
1796 Male, age 53, unknown 34.3
2668 Female, age 75, unknown 34.2
1895 Male, age 76, right hemisphere 33.5
1913 Female, age 42, unknown 33.1
1995 Male, age 72, unknown 32.8
2587 Male, age 74, left hemisphere 32.8
1839 Male, age 51, unknown 31.5
Ventral tegmental area
nTPM: 33.4
1915 Female, age 42, unknown 34.3
2410 Female, age 72, unknown 34.0
1942 Male, age 51, unknown 33.8
2218 Male, age 76, both hemispheres 33.3
2223 Female, age 72, unknown 32.5
2021 Male, age 53, unknown 32.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 47.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 47.4
Samples: 139

Max nTPM: 90.3
Min nTPM: 23.4
Std nTPM: 11.9
Median nTPM: 46.1
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 90.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 85.6
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 80.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 79.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 77.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ 60-69 years, male 75.6
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 71.4
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 70.1
GTEX-R55E-0011-R2A-SM-EYYV9 20-29 years, male 69.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 69.4
GTEX-1I1GS-0011-R2b-SM-CMKHG 60-69 years, male 68.6
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 37.9
FF:10158-103A5 76 years, female 37.9

MIDBRAIN - Mouse RNA-seqi
Average nTPM 13.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 13.2
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.7
Sample A Male 15.3
Sample B Male 11.7
Sample C Female 12.2
Sample D Female 13.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.3
70303803 Antisense, RP_050609_02_E09, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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