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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:8.5 nTPM
HPA:8.5 nTPM
GTEx:11.9 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:2.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014232
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.5
Sample id Sample description nTPM
Hippocampus
nTPM: 8.3
2621 Female, age 67, right hemisphere 9.1
1855 Male, age 76, left hemisphere 8.8
2148 Female, age 91, left hemisphere 8.7
2529 Female, age 94, left hemisphere 8.4
1898 Male, age 80, left hemisphere 7.6
1911 Female, age 85, right hemisphere 7.5
Dentate gyrus
nTPM: 8.5
2531 Female, age 67, both hemispheres 9.8
2530 Female, age 94, left hemisphere 8.8
2528 Male, age 74, both hemispheres 8.4
1927 Female, age 91, both hemispheres 8.3
2246 Female, age 85, both hemispheres 8.1
2010 Male, age 76, both hemispheres 7.9
Entorhinal gyrus
nTPM: 7.8
2686 Male, age 75, right hemisphere 9.2
1787 Male, age 76, left hemisphere 8.2
2613 Female, age 94, left hemisphere 8.0
2764 Male, age 80, right hemisphere 8.0
2117 Female, age 91, right hemisphere 7.3
1938 Female, age 85, left hemisphere 6.4
Hippocampus, CA1
nTPM: 7.7
2045 Male, age 76, both hemispheres 8.2
1873 Female, age 85, both hemispheres 8.0
2527 Male, age 74, both hemispheres 8.0
2082 Female, age 91, right hemisphere 7.7
2749 Male, age 80, left hemisphere 6.8
Hippocampus, CA2
nTPM: 7.9
1940 Female, age 85, left hemisphere 8.6
2437 Female, age 94, left hemisphere 8.4
1892 Male, age 76, both hemispheres 8.1
2113 Female, age 91, right hemisphere 8.0
1963 Male, age 80, left hemisphere 7.9
2249 Male, age 74, both hemispheres 6.6
Hippocampus, CA3
nTPM: 8.4
2620 Female, age 94, left hemisphere 11.9
2861 Female, age 67, both hemispheres 11.2
1867 Male, age 76, both hemispheres 7.6
2137 Male, age 80, left hemisphere 7.0
1891 Female, age 85, both hemispheres 6.4
2436 Male, age 74, both hemispheres 6.3
Parahippocampal cortex
nTPM: 7.9
2622 Female, age 67, right hemisphere 9.6
2532 Female, age 72, left hemisphere 9.1
2245 Female, age 91, both hemispheres 8.3
2250 Female, age 67, right hemisphere 7.9
2018 Male, age 76, both hemispheres 7.6
1990 Female, age 91, right hemisphere 7.5
2692 Male, age 74, both hemispheres 7.5
2693 Female, age 94, both hemispheres 7.2
1850 Male, age 80, both hemispheres 7.1
1933 Female, age 85, both hemispheres 6.9
Perirhinal gyrus
nTPM: 7.5
2848 Male, age 76, right hemisphere 8.4
2521 Female, age 94, right hemisphere 8.1
1847 Female, age 91, left hemisphere 7.4
1794 Male, age 80, right hemisphere 7.0
1841 Female, age 85, right hemisphere 6.9
Subiculum
nTPM: 7.3
2729 Female, age 91, right hemisphere 8.0
2619 Male, age 74, both hemispheres 7.6
1901 Male, age 80, both hemispheres 7.5
2438 Female, age 94, left hemisphere 7.4
2042 Male, age 76, both hemispheres 7.3
1977 Female, age 85, both hemispheres 6.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 24.4
Min nTPM: 3.2
Std nTPM: 4.1
Median nTPM: 11.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 24.4
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 22.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 22.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 21.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 21.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 20.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 20.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 19.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 19.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 19.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10153-102I9 76 years, female 0.1
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 3.0
Min nTPM: 1.5
Sample A Female 2.3
Sample B Female 1.5
Sample C Male 3.0
Sample D Male 2.0
Entorhinal cortex
nTPM: 1.6
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 1.7
Sample C Male 1.8
Sample D Male 1.8
Subiculum
nTPM: 2.2
Samples: 4

Max nTPM: 3.0
Min nTPM: 1.8
Sample A Female 3.0
Sample B Female 2.1
Sample C Male 1.9
Sample D Male 1.8
Ventral hippocampus
nTPM: 2.0
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.5
Sample A Female 1.9
Sample B Female 1.5
Sample C Male 2.4
Sample D Male 2.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.