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DBNDD2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:645.7 nTPM
HPA:645.7 nTPM
GTEx:749.6 nTPM
FANTOM5:214.3 Scaled Tags Per Million
Pig:43.9 nTPM
Mouse:149.1 nTPM
Allen mouse:18.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043991
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 645.7
Sample id Sample description nTPM
Hippocampus
nTPM: 573.7
1911 Female, age 85, right hemisphere 614.7
2621 Female, age 67, right hemisphere 592.5
2529 Female, age 94, left hemisphere 576.1
1898 Male, age 80, left hemisphere 571.9
1855 Male, age 76, left hemisphere 550.2
2148 Female, age 91, left hemisphere 536.8
Dentate gyrus
nTPM: 579.2
2530 Female, age 94, left hemisphere 689.0
2010 Male, age 76, both hemispheres 597.5
2528 Male, age 74, both hemispheres 576.4
2246 Female, age 85, both hemispheres 549.8
2531 Female, age 67, both hemispheres 537.1
1927 Female, age 91, both hemispheres 525.3
Entorhinal gyrus
nTPM: 587.4
2117 Female, age 91, right hemisphere 680.2
2764 Male, age 80, right hemisphere 631.4
1938 Female, age 85, left hemisphere 570.7
2613 Female, age 94, left hemisphere 558.6
2686 Male, age 75, right hemisphere 547.5
1787 Male, age 76, left hemisphere 536.2
Hippocampus, CA1
nTPM: 544.3
1873 Female, age 85, both hemispheres 569.0
2527 Male, age 74, both hemispheres 564.7
2082 Female, age 91, right hemisphere 550.3
2749 Male, age 80, left hemisphere 541.5
2045 Male, age 76, both hemispheres 496.0
Hippocampus, CA2
nTPM: 580.3
1963 Male, age 80, left hemisphere 620.9
2249 Male, age 74, both hemispheres 615.0
2437 Female, age 94, left hemisphere 587.3
1940 Female, age 85, left hemisphere 573.7
2113 Female, age 91, right hemisphere 556.8
1892 Male, age 76, both hemispheres 528.2
Hippocampus, CA3
nTPM: 541.5
1891 Female, age 85, both hemispheres 657.0
1867 Male, age 76, both hemispheres 562.8
2436 Male, age 74, both hemispheres 531.3
2137 Male, age 80, left hemisphere 506.3
2620 Female, age 94, left hemisphere 503.3
2861 Female, age 67, both hemispheres 488.0
Parahippocampal cortex
nTPM: 552.7
2692 Male, age 74, both hemispheres 606.1
2532 Female, age 72, left hemisphere 603.7
1990 Female, age 91, right hemisphere 581.5
2018 Male, age 76, both hemispheres 566.6
1850 Male, age 80, both hemispheres 563.0
1933 Female, age 85, both hemispheres 556.6
2245 Female, age 91, both hemispheres 548.7
2693 Female, age 94, both hemispheres 519.0
2250 Female, age 67, right hemisphere 500.1
2622 Female, age 67, right hemisphere 482.0
Perirhinal gyrus
nTPM: 515.6
1794 Male, age 80, right hemisphere 522.4
2848 Male, age 76, right hemisphere 522.1
2521 Female, age 94, right hemisphere 517.2
1847 Female, age 91, left hemisphere 510.2
1841 Female, age 85, right hemisphere 506.2
Subiculum
nTPM: 645.7
2042 Male, age 76, both hemispheres 766.0
1901 Male, age 80, both hemispheres 691.4
1977 Female, age 85, both hemispheres 642.4
2438 Female, age 94, left hemisphere 632.3
2619 Male, age 74, both hemispheres 584.7
2729 Female, age 91, right hemisphere 557.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 749.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 749.6
Samples: 197

Max nTPM: 2905.4
Min nTPM: 85.5
Std nTPM: 445.3
Median nTPM: 648.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 2905.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2561.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 2197.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1875.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 1822.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1730.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1704.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 1614.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 1596.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 1578.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 1573.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 214.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 214.3
FF:10153-102I9 76 years, female 279.0
FF:10169-103B7 60 years, female 149.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.9
Samples: 4

Max nTPM: 68.0
Min nTPM: 21.5
Sample A Female 68.0
Sample B Female 33.7
Sample C Male 52.4
Sample D Male 21.5
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 33.7
Min nTPM: 25.8
Sample A Female 29.3
Sample B Female 33.7
Sample C Male 25.8
Sample D Male 27.5
Subiculum
nTPM: 23.6
Samples: 4

Max nTPM: 30.7
Min nTPM: 18.9
Sample A Female 30.7
Sample B Female 23.6
Sample C Male 18.9
Sample D Male 21.1
Ventral hippocampus
nTPM: 31.7
Samples: 4

Max nTPM: 37.3
Min nTPM: 20.0
Sample A Female 37.3
Sample B Female 20.0
Sample C Male 32.4
Sample D Male 37.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 149.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.1
Samples: 4

Max nTPM: 115.8
Min nTPM: 86.0
Sample A Male 115.8
Sample B Male 103.4
Sample C Female 111.3
Sample D Female 86.0
Hippocampal formation
nTPM: 149.1
Samples: 4

Max nTPM: 188.8
Min nTPM: 118.5
Sample A Male 137.9
Sample B Male 118.5
Sample C Female 188.8
Sample D Female 151.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.0
45668 Antisense, RP_040324_01_H05, Mouse strain C57BL/6J (56 days, male) 18.0
67936386 Antisense, RP_040324_01_H05, Mouse strain C57BL/6J (56 days, male) 10.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.