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ZNF564
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.4 nTPM
HPA:5.4 nTPM
GTEx:2.9 nTPM
FANTOM5:17.7 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi
Antibody HPA043998
Glial cells Not detected
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 5.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 3.8
2481 Female, age 94, left hemisphere 4.6
2846 Female, age 79, unknown 4.5
1857 Female, age 85, left hemisphere 4.0
1854 Male, age 80, left hemisphere 3.9
2288 Male, age 75, left hemisphere 3.6
2289 Male, age 61, right hemisphere 3.6
2290 Female, age 72, unknown 3.6
1781 Male, age 74, unknown 2.8
Claustrum
nTPM: 4.0
2196 Female, age 79, unknown 5.2
2392 Female, age 94, both hemispheres 5.0
2645 Female, age 72, unknown 4.5
1956 Male, age 74, unknown 4.2
2292 Female, age 85, both hemispheres 3.9
2491 Male, age 75, both hemispheres 3.5
2568 Male, age 61, both hemispheres 3.3
2198 Male, age 80, both hemispheres 3.2
2284 Female, age 91, both hemispheres 3.0
Globus pallidus, externus
nTPM: 4.4
2646 Male, age 61, right hemisphere 6.1
2567 Female, age 72, unknown 5.8
1996 Male, age 80, right hemisphere 4.2
2395 Male, age 75, both hemispheres 3.1
2772 Female, age 79, unknown 2.5
Globus pallidus, internus
nTPM: 5.4
2778 Female, age 91, both hemispheres 7.7
2111 Female, age 85, right hemisphere 6.5
2037 Male, age 80, right hemisphere 5.5
2566 Female, age 72, unknown 5.3
1818 Male, age 74, unknown 4.9
2287 Male, age 75, right hemisphere 4.3
2483 Female, age 94, right hemisphere 3.5
Nucleus accumbens
nTPM: 4.0
2286 Male, age 75, left hemisphere 4.9
2824 Male, age 61, right hemisphere 4.7
1806 Female, age 85, left hemisphere 4.6
2732 Male, age 80, right hemisphere 4.3
2698 Female, age 72, unknown 4.2
2391 Female, age 94, left hemisphere 3.8
1856 Female, age 91, right hemisphere 3.3
1783 Male, age 74, unknown 2.6
Nucleus basalis of Meynert
nTPM: 4.8
2393 Male, age 80, right hemisphere 7.4
2484 Female, age 94, left hemisphere 5.2
2569 Male, age 61, both hemispheres 3.9
2821 Male, age 75, both hemispheres 2.9
Nucleus of the diagonal band
nTPM: 3.2
2029 Male, age 61, right hemisphere 4.0
2775 Male, age 80, right hemisphere 3.9
2195 Female, age 85, both hemispheres 3.0
1812 Female, age 91, both hemispheres 2.6
1979 Male, age 74, unknown 2.4
Olfactory tubercle
nTPM: 3.9
2487 Female, age 94, left hemisphere 4.8
2856 Male, age 75, right hemisphere 4.6
1846 Male, age 80, right hemisphere 3.2
1998 Female, age 91, both hemispheres 2.8
Putamen
nTPM: 4.5
1838 Male, age 80, right hemisphere 5.6
1829 Male, age 74, unknown 4.9
2466 Female, age 79, unknown 4.8
2482 Female, age 94, left hemisphere 4.3
1937 Female, age 91, right hemisphere 4.2
2489 Female, age 72, unknown 4.2
2647 Male, age 75, left hemisphere 3.2
Septal nuclei
nTPM: 3.2
2394 Male, age 61, left hemisphere 4.8
2059 Female, age 85, both hemispheres 3.9
2199 Male, age 80, right hemisphere 3.9
2629 Female, age 94, right hemisphere 2.8
2031 Female, age 72, unknown 2.6
2009 Female, age 91, both hemispheres 2.4
1960 Male, age 74, unknown 2.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 2.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2.7
Samples: 246

Max nTPM: 5.3
Min nTPM: 0.8
Std nTPM: 0.6
Median nTPM: 2.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 5.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 4.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 4.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 4.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 4.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 4.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 4.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 3.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 2.9
Samples: 246

Max nTPM: 6.6
Min nTPM: 1.3
Std nTPM: 0.7
Median nTPM: 2.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 6.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 5.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 5.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 5.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 4.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 4.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 4.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 4.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 4.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 4.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 4.3
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Brain - Putamen (basal ganglia)
Average nTPM: 2.7
Samples: 205

Max nTPM: 5.3
Min nTPM: 0.0
Std nTPM: 0.6
Median nTPM: 2.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 5.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 4.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 4.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 4.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 4.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 4.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 4.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 3.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 3.9
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 10.4
FF:10164-103B2 76 years, female 10.4
Globus pallidus
Scaled Tags Per Million: 17.7
FF:10161-103A8 76 years, female 18.9
FF:10175-103C4 60 years, female 16.5
Nucleus accumbens
Scaled Tags Per Million: 11.4
FF:10037-101F1 23-56 years, mixed 11.4
Putamen
Scaled Tags Per Million: 10.7
FF:10176-103C5 60 years, female 10.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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