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BRK1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:173.0 nTPM
HPA:173.0 nTPM
GTEx:128.9 nTPM
FANTOM5:144.6 Scaled Tags Per Million
Pig:202.5 nTPM
Mouse:350.7 nTPM
Allen mouse:12.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 173.0
Sample id Sample description nTPM
Hippocampus
nTPM: 165.3
1898 Male, age 80, left hemisphere 172.7
1855 Male, age 76, left hemisphere 166.5
2529 Female, age 94, left hemisphere 164.3
2621 Female, age 67, right hemisphere 164.3
2148 Female, age 91, left hemisphere 163.8
1911 Female, age 85, right hemisphere 160.2
Dentate gyrus
nTPM: 164.6
1927 Female, age 91, both hemispheres 168.3
2010 Male, age 76, both hemispheres 167.8
2530 Female, age 94, left hemisphere 165.0
2246 Female, age 85, both hemispheres 163.7
2528 Male, age 74, both hemispheres 162.0
2531 Female, age 67, both hemispheres 160.8
Entorhinal gyrus
nTPM: 164.9
1787 Male, age 76, left hemisphere 168.9
1938 Female, age 85, left hemisphere 168.8
2764 Male, age 80, right hemisphere 166.5
2613 Female, age 94, left hemisphere 165.7
2117 Female, age 91, right hemisphere 161.1
2686 Male, age 75, right hemisphere 158.5
Hippocampus, CA1
nTPM: 167.8
2749 Male, age 80, left hemisphere 180.9
2045 Male, age 76, both hemispheres 167.7
1873 Female, age 85, both hemispheres 164.8
2527 Male, age 74, both hemispheres 163.8
2082 Female, age 91, right hemisphere 161.8
Hippocampus, CA2
nTPM: 166.0
1892 Male, age 76, both hemispheres 174.3
1963 Male, age 80, left hemisphere 170.6
1940 Female, age 85, left hemisphere 165.2
2249 Male, age 74, both hemispheres 162.8
2113 Female, age 91, right hemisphere 161.9
2437 Female, age 94, left hemisphere 161.5
Hippocampus, CA3
nTPM: 165.9
2137 Male, age 80, left hemisphere 178.2
1867 Male, age 76, both hemispheres 171.3
2620 Female, age 94, left hemisphere 162.9
2861 Female, age 67, both hemispheres 161.2
2436 Male, age 74, both hemispheres 161.1
1891 Female, age 85, both hemispheres 160.7
Parahippocampal cortex
nTPM: 164.4
1850 Male, age 80, both hemispheres 172.2
2018 Male, age 76, both hemispheres 166.7
1933 Female, age 85, both hemispheres 166.6
1990 Female, age 91, right hemisphere 166.6
2250 Female, age 67, right hemisphere 164.8
2245 Female, age 91, both hemispheres 164.4
2532 Female, age 72, left hemisphere 163.5
2692 Male, age 74, both hemispheres 159.8
2622 Female, age 67, right hemisphere 159.7
2693 Female, age 94, both hemispheres 159.2
Perirhinal gyrus
nTPM: 173.0
1847 Female, age 91, left hemisphere 177.0
1841 Female, age 85, right hemisphere 176.4
1794 Male, age 80, right hemisphere 174.9
2521 Female, age 94, right hemisphere 168.5
2848 Male, age 76, right hemisphere 168.2
Subiculum
nTPM: 162.9
1977 Female, age 85, both hemispheres 166.5
1901 Male, age 80, both hemispheres 166.4
2619 Male, age 74, both hemispheres 162.4
2042 Male, age 76, both hemispheres 161.6
2438 Female, age 94, left hemisphere 160.4
2729 Female, age 91, right hemisphere 160.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 128.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 128.9
Samples: 197

Max nTPM: 266.9
Min nTPM: 75.3
Std nTPM: 28.4
Median nTPM: 124.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 266.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 244.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 209.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 204.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 197.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 195.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 192.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 191.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 186.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 184.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 184.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.6
FF:10169-103B7 60 years, female 161.1
FF:10153-102I9 76 years, female 128.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 202.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 202.5
Samples: 4

Max nTPM: 267.9
Min nTPM: 148.9
Sample A Female 267.9
Sample B Female 221.4
Sample C Male 171.9
Sample D Male 148.9
Entorhinal cortex
nTPM: 143.9
Samples: 4

Max nTPM: 157.4
Min nTPM: 106.1
Sample A Female 156.8
Sample B Female 157.4
Sample C Male 155.4
Sample D Male 106.1
Subiculum
nTPM: 142.5
Samples: 4

Max nTPM: 174.2
Min nTPM: 124.4
Sample A Female 174.2
Sample B Female 136.2
Sample C Male 135.1
Sample D Male 124.4
Ventral hippocampus
nTPM: 176.7
Samples: 4

Max nTPM: 204.9
Min nTPM: 141.2
Sample A Female 204.9
Sample B Female 141.2
Sample C Male 171.2
Sample D Male 189.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 350.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 350.7
Samples: 4

Max nTPM: 361.2
Min nTPM: 343.2
Sample A Male 345.1
Sample B Male 361.2
Sample C Female 353.2
Sample D Female 343.2
Hippocampal formation
nTPM: 345.4
Samples: 4

Max nTPM: 407.7
Min nTPM: 317.7
Sample A Male 407.7
Sample B Male 320.4
Sample C Female 335.7
Sample D Female 317.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.8
69445415 Antisense, RP_050419_01_B02, Mouse strain C57BL/6J (56 days, male) 13.5
74988744 Antisense, RP_060315_04_B12, Mouse strain C57BL/6J (56 days, male) 12.0

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The Human Protein Atlas

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