ABOUTMENU
HELP
NEWS
POC1B-GALNT4
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:0.5 nTPM
HPA:0.5 nTPM
GTEx:0.3 nTPM
FANTOM5:14.0 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 0.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.1
2289 Male, age 61, right hemisphere 0.3
2288 Male, age 75, left hemisphere 0.2
1857 Female, age 85, left hemisphere 0.1
1781 Male, age 74, unknown 0.0
1854 Male, age 80, left hemisphere 0.0
2290 Female, age 72, unknown 0.0
2481 Female, age 94, left hemisphere 0.0
2846 Female, age 79, unknown 0.0
Claustrum
nTPM: 0.1
2292 Female, age 85, both hemispheres 0.4
1956 Male, age 74, unknown 0.2
2284 Female, age 91, both hemispheres 0.2
2392 Female, age 94, both hemispheres 0.2
2568 Male, age 61, both hemispheres 0.2
2196 Female, age 79, unknown 0.1
2198 Male, age 80, both hemispheres 0.0
2491 Male, age 75, both hemispheres 0.0
2645 Female, age 72, unknown 0.0
Globus pallidus, externus
nTPM: 0.4
2646 Male, age 61, right hemisphere 0.6
1996 Male, age 80, right hemisphere 0.4
2567 Female, age 72, unknown 0.3
2772 Female, age 79, unknown 0.3
2395 Male, age 75, both hemispheres 0.1
Globus pallidus, internus
nTPM: 0.5
2111 Female, age 85, right hemisphere 0.9
2287 Male, age 75, right hemisphere 0.7
2566 Female, age 72, unknown 0.7
2037 Male, age 80, right hemisphere 0.5
2483 Female, age 94, right hemisphere 0.5
2778 Female, age 91, both hemispheres 0.5
1818 Male, age 74, unknown 0.0
Nucleus accumbens
nTPM: 0.2
2698 Female, age 72, unknown 0.5
2732 Male, age 80, right hemisphere 0.3
1806 Female, age 85, left hemisphere 0.2
2286 Male, age 75, left hemisphere 0.2
2391 Female, age 94, left hemisphere 0.2
1783 Male, age 74, unknown 0.1
1856 Female, age 91, right hemisphere 0.0
2824 Male, age 61, right hemisphere 0.0
Nucleus basalis of Meynert
nTPM: 0.2
2569 Male, age 61, both hemispheres 0.5
2393 Male, age 80, right hemisphere 0.1
2484 Female, age 94, left hemisphere 0.1
2821 Male, age 75, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 0.0
1979 Male, age 74, unknown 0.1
2195 Female, age 85, both hemispheres 0.1
1812 Female, age 91, both hemispheres 0.0
2029 Male, age 61, right hemisphere 0.0
2775 Male, age 80, right hemisphere 0.0
Olfactory tubercle
nTPM: 0.1
2856 Male, age 75, right hemisphere 0.3
1846 Male, age 80, right hemisphere 0.0
1998 Female, age 91, both hemispheres 0.0
2487 Female, age 94, left hemisphere 0.0
Putamen
nTPM: 0.0
2647 Male, age 75, left hemisphere 0.1
1829 Male, age 74, unknown 0.0
1838 Male, age 80, right hemisphere 0.0
1937 Female, age 91, right hemisphere 0.0
2466 Female, age 79, unknown 0.0
2482 Female, age 94, left hemisphere 0.0
2489 Female, age 72, unknown 0.0
Septal nuclei
nTPM: 0.1
2199 Male, age 80, right hemisphere 0.4
2629 Female, age 94, right hemisphere 0.3
2059 Female, age 85, both hemispheres 0.1
2394 Male, age 61, left hemisphere 0.1
1960 Male, age 74, unknown 0.0
2009 Female, age 91, both hemispheres 0.0
2031 Female, age 72, unknown 0.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 0.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.3
Samples: 246

Max nTPM: 1.4
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 0.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 0.9
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.2
Samples: 246

Max nTPM: 1.8
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 1.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 1.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 1.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 1.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 0.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 0.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 0.3
Samples: 205

Max nTPM: 1.5
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 10.5
FF:10164-103B2 76 years, female 10.5
Globus pallidus
Scaled Tags Per Million: 14.0
FF:10161-103A8 76 years, female 15.5
FF:10175-103C4 60 years, female 12.6
Nucleus accumbens
Scaled Tags Per Million: 12.4
FF:10037-101F1 23-56 years, mixed 12.4
Putamen
Scaled Tags Per Million: 8.2
FF:10176-103C5 60 years, female 8.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.