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MRPS21
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:93.8 nTPM
HPA:93.8 nTPM
GTEx:81.4 nTPM
FANTOM5:120.8 Scaled Tags Per Million
Pig:62.7 nTPM
Mouse:231.3 nTPM
Allen mouse:2.8 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 93.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 92.9
1857 Female, age 85, left hemisphere 96.4
2481 Female, age 94, left hemisphere 94.8
2288 Male, age 75, left hemisphere 93.8
2846 Female, age 79, unknown 93.5
1854 Male, age 80, left hemisphere 93.0
2290 Female, age 72, unknown 91.7
1781 Male, age 74, unknown 91.6
2289 Male, age 61, right hemisphere 88.5
Claustrum
nTPM: 89.0
2568 Male, age 61, both hemispheres 91.2
2284 Female, age 91, both hemispheres 91.1
2392 Female, age 94, both hemispheres 90.3
1956 Male, age 74, unknown 89.5
2198 Male, age 80, both hemispheres 89.4
2491 Male, age 75, both hemispheres 88.9
2196 Female, age 79, unknown 88.5
2645 Female, age 72, unknown 87.9
2292 Female, age 85, both hemispheres 84.5
Globus pallidus, externus
nTPM: 86.0
2772 Female, age 79, unknown 90.4
1996 Male, age 80, right hemisphere 89.3
2395 Male, age 75, both hemispheres 86.1
2567 Female, age 72, unknown 83.4
2646 Male, age 61, right hemisphere 80.8
Globus pallidus, internus
nTPM: 87.4
1818 Male, age 74, unknown 92.6
2287 Male, age 75, right hemisphere 89.6
2037 Male, age 80, right hemisphere 89.3
2483 Female, age 94, right hemisphere 87.9
2778 Female, age 91, both hemispheres 87.2
2566 Female, age 72, unknown 84.3
2111 Female, age 85, right hemisphere 80.6
Nucleus accumbens
nTPM: 92.2
1856 Female, age 91, right hemisphere 98.1
2824 Male, age 61, right hemisphere 95.5
1806 Female, age 85, left hemisphere 93.0
2286 Male, age 75, left hemisphere 92.3
2698 Female, age 72, unknown 92.1
1783 Male, age 74, unknown 91.3
2391 Female, age 94, left hemisphere 89.4
2732 Male, age 80, right hemisphere 85.8
Nucleus basalis of Meynert
nTPM: 87.5
2393 Male, age 80, right hemisphere 90.1
2821 Male, age 75, both hemispheres 90.0
2484 Female, age 94, left hemisphere 88.1
2569 Male, age 61, both hemispheres 82.0
Nucleus of the diagonal band
nTPM: 93.8
1812 Female, age 91, both hemispheres 96.0
2029 Male, age 61, right hemisphere 95.9
2775 Male, age 80, right hemisphere 95.2
2195 Female, age 85, both hemispheres 93.3
1979 Male, age 74, unknown 88.4
Olfactory tubercle
nTPM: 93.4
1998 Female, age 91, both hemispheres 95.5
1846 Male, age 80, right hemisphere 95.2
2856 Male, age 75, right hemisphere 92.1
2487 Female, age 94, left hemisphere 90.7
Putamen
nTPM: 90.2
1838 Male, age 80, right hemisphere 97.0
1937 Female, age 91, right hemisphere 95.6
2482 Female, age 94, left hemisphere 90.3
2466 Female, age 79, unknown 89.9
1829 Male, age 74, unknown 89.4
2647 Male, age 75, left hemisphere 85.0
2489 Female, age 72, unknown 84.2
Septal nuclei
nTPM: 91.3
2031 Female, age 72, unknown 95.6
1960 Male, age 74, unknown 94.5
2629 Female, age 94, right hemisphere 94.5
2009 Female, age 91, both hemispheres 94.4
2059 Female, age 85, both hemispheres 87.9
2199 Male, age 80, right hemisphere 86.5
2394 Male, age 61, left hemisphere 85.9

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 81.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 76.3
Samples: 246

Max nTPM: 158.8
Min nTPM: 37.9
Std nTPM: 17.5
Median nTPM: 74.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 158.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 156.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 154.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 129.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 129.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 124.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 120.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 114.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 114.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 113.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 107.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 81.4
Samples: 246

Max nTPM: 150.8
Min nTPM: 45.2
Std nTPM: 17.1
Median nTPM: 79.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 150.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 150.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 133.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 130.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 121.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 120.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 117.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 116.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 115.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 114.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 113.6
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Brain - Putamen (basal ganglia)
Average nTPM: 76.3
Samples: 205

Max nTPM: 126.3
Min nTPM: 36.6
Std nTPM: 16.1
Median nTPM: 75.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 126.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 122.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 119.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 117.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 114.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 113.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 112.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 111.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 107.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 105.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 105.1
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 94.4
FF:10164-103B2 76 years, female 94.4
Globus pallidus
Scaled Tags Per Million: 86.2
FF:10175-103C4 60 years, female 107.3
FF:10161-103A8 76 years, female 65.2
Nucleus accumbens
Scaled Tags Per Million: 107.1
FF:10037-101F1 23-56 years, mixed 107.1
Putamen
Scaled Tags Per Million: 120.8
FF:10176-103C5 60 years, female 120.8

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 62.7
Pig sample Sample description nTPM
Caudate
nTPM: 56.5
Samples: 4

Max nTPM: 70.7
Min nTPM: 47.4
Sample A Female 55.8
Sample B Female 52.1
Sample C Male 70.7
Sample D Male 47.4
Putamen
nTPM: 62.7
Samples: 4

Max nTPM: 80.7
Min nTPM: 51.2
Sample A Female 61.9
Sample B Female 51.2
Sample C Male 80.7
Sample D Male 57.1
Septum
nTPM: 49.2
Samples: 4

Max nTPM: 58.0
Min nTPM: 43.5
Sample A Female 58.0
Sample B Female 47.2
Sample C Male 43.5
Sample D Male 47.9
Ventral pallidum
nTPM: 49.1
Samples: 4

Max nTPM: 51.6
Min nTPM: 45.8
Sample A Female 51.6
Sample B Female 49.1
Sample C Male 45.8
Sample D Male 49.9

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 231.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 231.4
Samples: 4

Max nTPM: 255.5
Min nTPM: 211.0
Sample A Male 211.0
Sample B Male 255.5
Sample C Female 240.0
Sample D Female 219.0
Septum
nTPM: 163.8
Samples: 4

Max nTPM: 171.4
Min nTPM: 143.6
Sample A Male 143.6
Sample B Male 171.3
Sample C Female 171.4
Sample D Female 168.9
Ventral forebrain
nTPM: 192.0
Samples: 4

Max nTPM: 226.8
Min nTPM: 177.5
Sample A Male 185.8
Sample B Male 177.5
Sample C Female 226.8
Sample D Female 177.9

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.8
68744803 Antisense, RP_050208_01_F09, Mouse strain C57BL/6J (56 days, male) 2.8
Pallidum
Expression energy: 2.3
68744803 Antisense, RP_050208_01_F09, Mouse strain C57BL/6J (56 days, male) 2.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.