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FAM156A
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:10.4 nTPM
HPA:10.4 nTPM
GTEx:18.7 nTPM
FANTOM5:5.5 Scaled Tags Per Million

CAUDATE - Antibody stainingi
Antibody HPA056640Antibody HPA056643
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 10.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 7.4
1781 Male, age 74, unknown 13.6
2289 Male, age 61, right hemisphere 10.6
1854 Male, age 80, left hemisphere 10.2
2288 Male, age 75, left hemisphere 6.1
1857 Female, age 85, left hemisphere 5.3
2290 Female, age 72, unknown 5.3
2846 Female, age 79, unknown 5.0
2481 Female, age 94, left hemisphere 3.1
Claustrum
nTPM: 10.4
2568 Male, age 61, both hemispheres 15.8
2284 Female, age 91, both hemispheres 13.2
2491 Male, age 75, both hemispheres 12.7
2198 Male, age 80, both hemispheres 11.3
2196 Female, age 79, unknown 10.7
2645 Female, age 72, unknown 10.1
1956 Male, age 74, unknown 8.3
2292 Female, age 85, both hemispheres 7.6
2392 Female, age 94, both hemispheres 3.8
Globus pallidus, externus
nTPM: 7.2
2646 Male, age 61, right hemisphere 9.9
2567 Female, age 72, unknown 8.6
2772 Female, age 79, unknown 8.2
1996 Male, age 80, right hemisphere 5.6
2395 Male, age 75, both hemispheres 3.4
Globus pallidus, internus
nTPM: 5.4
2566 Female, age 72, unknown 8.7
1818 Male, age 74, unknown 6.8
2483 Female, age 94, right hemisphere 6.0
2037 Male, age 80, right hemisphere 4.6
2111 Female, age 85, right hemisphere 4.5
2287 Male, age 75, right hemisphere 3.8
2778 Female, age 91, both hemispheres 3.2
Nucleus accumbens
nTPM: 9.5
2824 Male, age 61, right hemisphere 14.9
2732 Male, age 80, right hemisphere 11.1
1856 Female, age 91, right hemisphere 10.8
1806 Female, age 85, left hemisphere 10.1
2286 Male, age 75, left hemisphere 9.2
1783 Male, age 74, unknown 7.5
2698 Female, age 72, unknown 7.1
2391 Female, age 94, left hemisphere 5.6
Nucleus basalis of Meynert
nTPM: 9.8
2569 Male, age 61, both hemispheres 12.2
2821 Male, age 75, both hemispheres 11.9
2393 Male, age 80, right hemisphere 7.8
2484 Female, age 94, left hemisphere 7.0
Nucleus of the diagonal band
nTPM: 8.4
1979 Male, age 74, unknown 11.5
2195 Female, age 85, both hemispheres 9.3
2775 Male, age 80, right hemisphere 8.8
1812 Female, age 91, both hemispheres 6.4
2029 Male, age 61, right hemisphere 6.1
Olfactory tubercle
nTPM: 9.6
2856 Male, age 75, right hemisphere 14.1
1998 Female, age 91, both hemispheres 10.4
1846 Male, age 80, right hemisphere 7.1
2487 Female, age 94, left hemisphere 6.6
Putamen
nTPM: 7.4
1838 Male, age 80, right hemisphere 10.4
2647 Male, age 75, left hemisphere 7.5
1937 Female, age 91, right hemisphere 7.4
2489 Female, age 72, unknown 7.1
1829 Male, age 74, unknown 6.7
2482 Female, age 94, left hemisphere 6.5
2466 Female, age 79, unknown 6.2
Septal nuclei
nTPM: 8.0
2199 Male, age 80, right hemisphere 13.9
2394 Male, age 61, left hemisphere 8.8
2059 Female, age 85, both hemispheres 8.6
1960 Male, age 74, unknown 8.2
2629 Female, age 94, right hemisphere 6.5
2009 Female, age 91, both hemispheres 6.1
2031 Female, age 72, unknown 4.1

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 18.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 17.4
Samples: 246

Max nTPM: 32.4
Min nTPM: 3.0
Std nTPM: 5.3
Median nTPM: 17.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 32.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 28.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 28.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 28.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 28.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 27.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 27.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 27.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 27.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 26.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 26.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 18.7
Samples: 246

Max nTPM: 40.9
Min nTPM: 3.9
Std nTPM: 6.2
Median nTPM: 18.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 40.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 39.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 34.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 33.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 32.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 31.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 31.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 30.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 30.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 30.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 30.9
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Brain - Putamen (basal ganglia)
Average nTPM: 16.3
Samples: 205

Max nTPM: 32.1
Min nTPM: 3.3
Std nTPM: 5.3
Median nTPM: 16.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 32.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 31.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 28.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 27.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 27.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 27.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 26.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 25.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 24.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 24.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 24.4
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 5.2
FF:10164-103B2 76 years, female 5.2
Globus pallidus
Scaled Tags Per Million: 4.7
FF:10161-103A8 76 years, female 5.6
FF:10175-103C4 60 years, female 3.9
Nucleus accumbens
Scaled Tags Per Million: 5.5
FF:10037-101F1 23-56 years, mixed 5.5
Putamen
Scaled Tags Per Million: 3.7
FF:10176-103C5 60 years, female 3.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.