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GRIN2B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:29.4 nTPM
HPA:29.4 nTPM
GTEx:3.9 nTPM
FANTOM5:80.7 Scaled Tags Per Million
Pig:79.6 nTPM
Mouse:28.0 nTPM
Allen mouse:19.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069762
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
2621 Female, age 67, right hemisphere 24.5
2148 Female, age 91, left hemisphere 19.8
1855 Male, age 76, left hemisphere 8.0
1898 Male, age 80, left hemisphere 7.8
1911 Female, age 85, right hemisphere 2.9
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 15.6
2531 Female, age 67, both hemispheres 40.2
1927 Female, age 91, both hemispheres 39.9
2246 Female, age 85, both hemispheres 9.0
2528 Male, age 74, both hemispheres 3.4
2010 Male, age 76, both hemispheres 1.1
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 5.2
2613 Female, age 94, left hemisphere 27.1
1938 Female, age 85, left hemisphere 3.8
2764 Male, age 80, right hemisphere 0.5
1787 Male, age 76, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 29.4
2749 Male, age 80, left hemisphere 92.1
2527 Male, age 74, both hemispheres 23.1
2045 Male, age 76, both hemispheres 16.6
1873 Female, age 85, both hemispheres 15.3
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 5.0
1963 Male, age 80, left hemisphere 14.3
1892 Male, age 76, both hemispheres 10.1
2249 Male, age 74, both hemispheres 5.7
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 29.2
2137 Male, age 80, left hemisphere 79.4
2620 Female, age 94, left hemisphere 54.2
2861 Female, age 67, both hemispheres 27.9
2436 Male, age 74, both hemispheres 8.5
1867 Male, age 76, both hemispheres 5.5
1891 Female, age 85, both hemispheres 0.0
Parahippocampal cortex
nTPM: 6.8
2245 Female, age 91, both hemispheres 30.1
2693 Female, age 94, both hemispheres 15.7
2250 Female, age 67, right hemisphere 11.8
1850 Male, age 80, both hemispheres 4.1
1933 Female, age 85, both hemispheres 3.1
2622 Female, age 67, right hemisphere 1.7
1990 Female, age 91, right hemisphere 1.4
2018 Male, age 76, both hemispheres 0.0
2532 Female, age 72, left hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 18.9
2521 Female, age 94, right hemisphere 42.5
1847 Female, age 91, left hemisphere 35.7
1794 Male, age 80, right hemisphere 9.0
1841 Female, age 85, right hemisphere 6.5
2848 Male, age 76, right hemisphere 0.8
Subiculum
nTPM: 1.6
1901 Male, age 80, both hemispheres 9.7
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.9
Samples: 197

Max nTPM: 13.9
Min nTPM: 0.0
Std nTPM: 2.8
Median nTPM: 3.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 13.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 13.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 12.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 11.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 11.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 11.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 10.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 9.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 9.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 9.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 9.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.7
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 57.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.6
Samples: 4

Max nTPM: 98.9
Min nTPM: 63.3
Sample A Female 86.7
Sample B Female 98.9
Sample C Male 69.5
Sample D Male 63.3
Entorhinal cortex
nTPM: 63.3
Samples: 4

Max nTPM: 71.8
Min nTPM: 53.9
Sample A Female 64.6
Sample B Female 53.9
Sample C Male 71.8
Sample D Male 62.8
Subiculum
nTPM: 66.2
Samples: 4

Max nTPM: 83.9
Min nTPM: 49.7
Sample A Female 83.9
Sample B Female 60.3
Sample C Male 70.7
Sample D Male 49.7
Ventral hippocampus
nTPM: 75.1
Samples: 4

Max nTPM: 113.6
Min nTPM: 54.7
Sample A Female 56.9
Sample B Female 54.7
Sample C Male 75.1
Sample D Male 113.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 47.0
Min nTPM: 19.8
Sample A Male 22.6
Sample B Male 19.8
Sample C Female 22.8
Sample D Female 47.0
Hippocampal formation
nTPM: 26.1
Samples: 4

Max nTPM: 43.2
Min nTPM: 13.7
Sample A Male 13.7
Sample B Male 33.1
Sample C Female 43.2
Sample D Female 14.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.0
69257725 Antisense, RP_050331_03_B11, Mouse strain C57BL/6J (56 days, male) 21.5
74988710 Antisense, RP_060315_04_A09, Mouse strain C57BL/6J (56 days, male) 16.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.