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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:4.1 nTPM
HPA:4.1 nTPM
GTEx:6.3 nTPM
FANTOM5:45.7 Scaled Tags Per Million
Pig:27.8 nTPM
Mouse:28.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023554Antibody HPA023555
Glial cells MediumLow
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 4.1
Sample id Sample description nTPM
Hippocampus
nTPM: 3.3
2529 Female, age 94, left hemisphere 4.1
1855 Male, age 76, left hemisphere 3.7
1911 Female, age 85, right hemisphere 3.6
1898 Male, age 80, left hemisphere 3.2
2621 Female, age 67, right hemisphere 2.7
2148 Female, age 91, left hemisphere 2.2
Dentate gyrus
nTPM: 3.1
2530 Female, age 94, left hemisphere 4.4
2010 Male, age 76, both hemispheres 3.7
1927 Female, age 91, both hemispheres 3.2
2528 Male, age 74, both hemispheres 2.8
2531 Female, age 67, both hemispheres 2.6
2246 Female, age 85, both hemispheres 2.1
Entorhinal gyrus
nTPM: 3.1
2117 Female, age 91, right hemisphere 4.8
2686 Male, age 75, right hemisphere 3.4
1787 Male, age 76, left hemisphere 3.3
2764 Male, age 80, right hemisphere 2.8
1938 Female, age 85, left hemisphere 2.5
2613 Female, age 94, left hemisphere 1.9
Hippocampus, CA1
nTPM: 3.5
2045 Male, age 76, both hemispheres 4.0
2749 Male, age 80, left hemisphere 3.9
2082 Female, age 91, right hemisphere 3.4
2527 Male, age 74, both hemispheres 3.4
1873 Female, age 85, both hemispheres 3.0
Hippocampus, CA2
nTPM: 3.8
2249 Male, age 74, both hemispheres 4.7
2437 Female, age 94, left hemisphere 4.1
1892 Male, age 76, both hemispheres 3.9
1940 Female, age 85, left hemisphere 3.6
2113 Female, age 91, right hemisphere 3.3
1963 Male, age 80, left hemisphere 3.1
Hippocampus, CA3
nTPM: 3.4
1891 Female, age 85, both hemispheres 5.4
1867 Male, age 76, both hemispheres 4.5
2436 Male, age 74, both hemispheres 3.8
2861 Female, age 67, both hemispheres 2.7
2620 Female, age 94, left hemisphere 2.6
2137 Male, age 80, left hemisphere 1.5
Parahippocampal cortex
nTPM: 3.5
1850 Male, age 80, both hemispheres 4.8
2692 Male, age 74, both hemispheres 4.0
2018 Male, age 76, both hemispheres 3.9
2250 Female, age 67, right hemisphere 3.7
1933 Female, age 85, both hemispheres 3.4
2693 Female, age 94, both hemispheres 3.2
1990 Female, age 91, right hemisphere 3.1
2532 Female, age 72, left hemisphere 3.1
2622 Female, age 67, right hemisphere 3.1
2245 Female, age 91, both hemispheres 2.4
Perirhinal gyrus
nTPM: 4.1
2521 Female, age 94, right hemisphere 4.9
1794 Male, age 80, right hemisphere 4.4
1847 Female, age 91, left hemisphere 4.0
2848 Male, age 76, right hemisphere 3.6
1841 Female, age 85, right hemisphere 3.5
Subiculum
nTPM: 3.5
2438 Female, age 94, left hemisphere 5.2
1977 Female, age 85, both hemispheres 4.5
2619 Male, age 74, both hemispheres 4.0
2729 Female, age 91, right hemisphere 3.2
2042 Male, age 76, both hemispheres 2.9
1901 Male, age 80, both hemispheres 1.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.3
Samples: 197

Max nTPM: 12.3
Min nTPM: 3.5
Std nTPM: 1.5
Median nTPM: 6.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 12.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 11.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 11.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 10.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 10.1
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 9.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 9.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 9.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 9.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 9.0
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 8.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.7
FF:10153-102I9 76 years, female 55.9
FF:10169-103B7 60 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.8
Samples: 4

Max nTPM: 31.4
Min nTPM: 25.2
Sample A Female 31.4
Sample B Female 29.1
Sample C Male 25.6
Sample D Male 25.2
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 29.6
Min nTPM: 24.7
Sample A Female 26.7
Sample B Female 26.0
Sample C Male 29.6
Sample D Male 24.7
Subiculum
nTPM: 27.8
Samples: 4

Max nTPM: 35.1
Min nTPM: 24.3
Sample A Female 35.1
Sample B Female 25.7
Sample C Male 26.1
Sample D Male 24.3
Ventral hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 27.2
Min nTPM: 22.4
Sample A Female 23.9
Sample B Female 22.4
Sample C Male 27.2
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.3
Samples: 4

Max nTPM: 27.8
Min nTPM: 22.2
Sample A Male 25.9
Sample B Male 22.2
Sample C Female 25.4
Sample D Female 27.8
Hippocampal formation
nTPM: 28.6
Samples: 4

Max nTPM: 32.9
Min nTPM: 25.1
Sample A Male 25.2
Sample B Male 31.2
Sample C Female 32.9
Sample D Female 25.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71495783 Antisense, RP_050913_03_E12, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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