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CCL4L2
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:0.3 nTPM
HPA:0.3 nTPM
GTEx:3.9 nTPM
FANTOM5:0.4 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 0.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.3
1781 Male, age 74, unknown 0.4
2288 Male, age 75, left hemisphere 0.3
2290 Female, age 72, unknown 0.3
2481 Female, age 94, left hemisphere 0.3
2846 Female, age 79, unknown 0.3
1854 Male, age 80, left hemisphere 0.2
1857 Female, age 85, left hemisphere 0.2
2289 Male, age 61, right hemisphere 0.2
Claustrum
nTPM: 0.3
2196 Female, age 79, unknown 0.3
2284 Female, age 91, both hemispheres 0.3
2292 Female, age 85, both hemispheres 0.3
2392 Female, age 94, both hemispheres 0.3
2491 Male, age 75, both hemispheres 0.3
2645 Female, age 72, unknown 0.3
1956 Male, age 74, unknown 0.2
2198 Male, age 80, both hemispheres 0.2
2568 Male, age 61, both hemispheres 0.2
Globus pallidus, externus
nTPM: 0.3
1996 Male, age 80, right hemisphere 0.3
2395 Male, age 75, both hemispheres 0.3
2772 Female, age 79, unknown 0.3
2567 Female, age 72, unknown 0.2
2646 Male, age 61, right hemisphere 0.2
Globus pallidus, internus
nTPM: 0.3
2111 Female, age 85, right hemisphere 0.3
2287 Male, age 75, right hemisphere 0.3
2483 Female, age 94, right hemisphere 0.3
2566 Female, age 72, unknown 0.3
2778 Female, age 91, both hemispheres 0.3
1818 Male, age 74, unknown 0.2
2037 Male, age 80, right hemisphere 0.2
Nucleus accumbens
nTPM: 0.2
1856 Female, age 91, right hemisphere 0.3
2286 Male, age 75, left hemisphere 0.3
2391 Female, age 94, left hemisphere 0.3
1783 Male, age 74, unknown 0.2
1806 Female, age 85, left hemisphere 0.2
2698 Female, age 72, unknown 0.2
2732 Male, age 80, right hemisphere 0.2
2824 Male, age 61, right hemisphere 0.2
Nucleus basalis of Meynert
nTPM: 0.3
2484 Female, age 94, left hemisphere 0.3
2821 Male, age 75, both hemispheres 0.3
2393 Male, age 80, right hemisphere 0.2
2569 Male, age 61, both hemispheres 0.2
Nucleus of the diagonal band
nTPM: 0.2
1812 Female, age 91, both hemispheres 0.3
2775 Male, age 80, right hemisphere 0.3
1979 Male, age 74, unknown 0.2
2029 Male, age 61, right hemisphere 0.2
2195 Female, age 85, both hemispheres 0.2
Olfactory tubercle
nTPM: 0.3
1846 Male, age 80, right hemisphere 0.4
1998 Female, age 91, both hemispheres 0.3
2487 Female, age 94, left hemisphere 0.3
2856 Male, age 75, right hemisphere 0.3
Putamen
nTPM: 0.3
1937 Female, age 91, right hemisphere 0.3
2466 Female, age 79, unknown 0.3
2482 Female, age 94, left hemisphere 0.3
2489 Female, age 72, unknown 0.3
2647 Male, age 75, left hemisphere 0.3
1829 Male, age 74, unknown 0.2
1838 Male, age 80, right hemisphere 0.2
Septal nuclei
nTPM: 0.3
2009 Female, age 91, both hemispheres 0.3
2031 Female, age 72, unknown 0.3
2059 Female, age 85, both hemispheres 0.3
2629 Female, age 94, right hemisphere 0.3
1960 Male, age 74, unknown 0.2
2199 Male, age 80, right hemisphere 0.2
2394 Male, age 61, left hemisphere 0.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 3.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 3.0
Samples: 246

Max nTPM: 70.1
Min nTPM: 0.0
Std nTPM: 8.1
Median nTPM: 1.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 70.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 68.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 62.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 39.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 27.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 25.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 17.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 15.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 14.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 13.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 9.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 2.0
Samples: 246

Max nTPM: 50.7
Min nTPM: 0.0
Std nTPM: 4.7
Median nTPM: 1.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 50.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 42.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 17.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 16.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 16.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 13.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 13.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 12.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 10.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 6.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 5.7
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Brain - Putamen (basal ganglia)
Average nTPM: 3.9
Samples: 205

Max nTPM: 174.4
Min nTPM: 0.0
Std nTPM: 15.6
Median nTPM: 1.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 174.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 108.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 64.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 63.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 30.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 17.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 16.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 15.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 14.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 13.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 12.0
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 0.0
FF:10164-103B2 76 years, female 0.0
Globus pallidus
Scaled Tags Per Million: 0.0
FF:10175-103C4 60 years, female 0.0
FF:10161-103A8 76 years, female 0.0
Nucleus accumbens
Scaled Tags Per Million: 0.4
FF:10037-101F1 23-56 years, mixed 0.4
Putamen
Scaled Tags Per Million: 0.0
FF:10176-103C5 60 years, female 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.