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PIP4K2B
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:85.6 nTPM
HPA:85.6 nTPM
GTEx:65.1 nTPM
FANTOM5:100.0 Scaled Tags Per Million
Pig:52.3 nTPM
Mouse:56.7 nTPM
Allen mouse:8.9 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 85.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 69.1
2846 Female, age 79, unknown 72.0
1857 Female, age 85, left hemisphere 71.6
1781 Male, age 74, unknown 71.5
2290 Female, age 72, unknown 70.0
1854 Male, age 80, left hemisphere 69.9
2288 Male, age 75, left hemisphere 68.8
2481 Female, age 94, left hemisphere 64.4
2289 Male, age 61, right hemisphere 64.3
Claustrum
nTPM: 78.9
2198 Male, age 80, both hemispheres 87.1
2284 Female, age 91, both hemispheres 83.3
2491 Male, age 75, both hemispheres 83.0
2568 Male, age 61, both hemispheres 80.9
2392 Female, age 94, both hemispheres 80.3
2645 Female, age 72, unknown 79.3
1956 Male, age 74, unknown 75.3
2196 Female, age 79, unknown 74.7
2292 Female, age 85, both hemispheres 66.5
Globus pallidus, externus
nTPM: 57.8
2395 Male, age 75, both hemispheres 62.9
2772 Female, age 79, unknown 58.5
1996 Male, age 80, right hemisphere 56.8
2567 Female, age 72, unknown 55.4
2646 Male, age 61, right hemisphere 55.3
Globus pallidus, internus
nTPM: 58.5
2483 Female, age 94, right hemisphere 69.9
2287 Male, age 75, right hemisphere 63.8
1818 Male, age 74, unknown 57.7
2566 Female, age 72, unknown 55.9
2037 Male, age 80, right hemisphere 54.8
2111 Female, age 85, right hemisphere 53.7
2778 Female, age 91, both hemispheres 53.5
Nucleus accumbens
nTPM: 69.4
1856 Female, age 91, right hemisphere 79.0
1783 Male, age 74, unknown 75.5
2824 Male, age 61, right hemisphere 70.9
1806 Female, age 85, left hemisphere 70.2
2286 Male, age 75, left hemisphere 68.3
2698 Female, age 72, unknown 65.1
2391 Female, age 94, left hemisphere 64.2
2732 Male, age 80, right hemisphere 61.6
Nucleus basalis of Meynert
nTPM: 63.1
2484 Female, age 94, left hemisphere 69.6
2393 Male, age 80, right hemisphere 64.8
2569 Male, age 61, both hemispheres 59.5
2821 Male, age 75, both hemispheres 58.7
Nucleus of the diagonal band
nTPM: 85.3
2775 Male, age 80, right hemisphere 92.8
2029 Male, age 61, right hemisphere 89.7
2195 Female, age 85, both hemispheres 88.5
1812 Female, age 91, both hemispheres 84.4
1979 Male, age 74, unknown 71.3
Olfactory tubercle
nTPM: 85.6
2487 Female, age 94, left hemisphere 92.9
1846 Male, age 80, right hemisphere 88.3
1998 Female, age 91, both hemispheres 86.6
2856 Male, age 75, right hemisphere 74.7
Putamen
nTPM: 71.3
1838 Male, age 80, right hemisphere 77.6
2466 Female, age 79, unknown 72.3
2482 Female, age 94, left hemisphere 70.5
1937 Female, age 91, right hemisphere 70.3
2489 Female, age 72, unknown 69.8
1829 Male, age 74, unknown 69.2
2647 Male, age 75, left hemisphere 69.0
Septal nuclei
nTPM: 78.5
1960 Male, age 74, unknown 91.1
2031 Female, age 72, unknown 86.6
2629 Female, age 94, right hemisphere 86.1
2009 Female, age 91, both hemispheres 81.8
2059 Female, age 85, both hemispheres 76.0
2394 Male, age 61, left hemisphere 67.0
2199 Male, age 80, right hemisphere 60.7

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 65.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 55.0
Samples: 246

Max nTPM: 91.6
Min nTPM: 29.2
Std nTPM: 10.1
Median nTPM: 55.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 91.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 81.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 80.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 79.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 75.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 74.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 74.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 73.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 72.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 72.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 65.1
Samples: 246

Max nTPM: 90.7
Min nTPM: 17.3
Std nTPM: 12.6
Median nTPM: 67.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 90.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 89.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 89.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 88.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 88.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 86.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 84.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 84.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 84.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 83.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 83.1
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Brain - Putamen (basal ganglia)
Average nTPM: 55.2
Samples: 205

Max nTPM: 84.3
Min nTPM: 22.4
Std nTPM: 9.4
Median nTPM: 54.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 84.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 79.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 76.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 75.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 74.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 74.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 73.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 73.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 72.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 72.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 72.1
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 80.6
FF:10164-103B2 76 years, female 80.6
Globus pallidus
Scaled Tags Per Million: 52.1
FF:10161-103A8 76 years, female 55.2
FF:10175-103C4 60 years, female 48.9
Nucleus accumbens
Scaled Tags Per Million: 82.6
FF:10037-101F1 23-56 years, mixed 82.6
Putamen
Scaled Tags Per Million: 100.0
FF:10176-103C5 60 years, female 100.0

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 52.3
Pig sample Sample description nTPM
Caudate
nTPM: 48.5
Samples: 4

Max nTPM: 57.4
Min nTPM: 40.7
Sample A Female 40.7
Sample B Female 48.8
Sample C Male 57.4
Sample D Male 47.0
Putamen
nTPM: 48.7
Samples: 4

Max nTPM: 55.0
Min nTPM: 42.6
Sample A Female 42.6
Sample B Female 43.7
Sample C Male 53.6
Sample D Male 55.0
Septum
nTPM: 51.4
Samples: 4

Max nTPM: 57.0
Min nTPM: 43.9
Sample A Female 55.0
Sample B Female 49.5
Sample C Male 57.0
Sample D Male 43.9
Ventral pallidum
nTPM: 52.4
Samples: 4

Max nTPM: 65.5
Min nTPM: 45.5
Sample A Female 46.1
Sample B Female 45.5
Sample C Male 65.5
Sample D Male 52.3

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 56.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 56.7
Samples: 4

Max nTPM: 57.6
Min nTPM: 55.4
Sample A Male 55.4
Sample B Male 56.8
Sample C Female 57.6
Sample D Female 56.9
Septum
nTPM: 44.2
Samples: 4

Max nTPM: 49.6
Min nTPM: 40.0
Sample A Male 49.6
Sample B Male 42.8
Sample C Female 40.0
Sample D Female 44.5
Ventral forebrain
nTPM: 50.7
Samples: 4

Max nTPM: 55.0
Min nTPM: 44.2
Sample A Male 50.5
Sample B Male 55.0
Sample C Female 44.2
Sample D Female 52.9

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.9
69012687 Antisense, RP_050309_01_C06, Mouse strain C57BL/6J (56 days, male) 8.9
Pallidum
Expression energy: 6.9
69012687 Antisense, RP_050309_01_C06, Mouse strain C57BL/6J (56 days, male) 6.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.