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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.6 nTPM
HPA:13.6 nTPM
GTEx:49.5 nTPM
FANTOM5:41.5 Scaled Tags Per Million
Pig:58.1 nTPM
Mouse:76.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009701Antibody HPA063795
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 4.8
1911 Female, age 85, right hemisphere 9.8
2621 Female, age 67, right hemisphere 6.0
2148 Female, age 91, left hemisphere 4.2
2529 Female, age 94, left hemisphere 4.1
1855 Male, age 76, left hemisphere 3.3
1898 Male, age 80, left hemisphere 1.2
Dentate gyrus
nTPM: 6.3
2530 Female, age 94, left hemisphere 10.9
2010 Male, age 76, both hemispheres 10.0
2528 Male, age 74, both hemispheres 6.3
2246 Female, age 85, both hemispheres 5.5
2531 Female, age 67, both hemispheres 4.8
1927 Female, age 91, both hemispheres 0.4
Entorhinal gyrus
nTPM: 13.6
2613 Female, age 94, left hemisphere 24.7
2764 Male, age 80, right hemisphere 20.3
2117 Female, age 91, right hemisphere 11.4
1787 Male, age 76, left hemisphere 10.6
2686 Male, age 75, right hemisphere 8.9
1938 Female, age 85, left hemisphere 5.4
Hippocampus, CA1
nTPM: 2.5
1873 Female, age 85, both hemispheres 5.9
2082 Female, age 91, right hemisphere 2.7
2527 Male, age 74, both hemispheres 2.3
2045 Male, age 76, both hemispheres 1.7
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 6.2
2437 Female, age 94, left hemisphere 12.2
2249 Male, age 74, both hemispheres 8.4
1963 Male, age 80, left hemisphere 6.8
1940 Female, age 85, left hemisphere 6.3
2113 Female, age 91, right hemisphere 3.5
1892 Male, age 76, both hemispheres 0.0
Hippocampus, CA3
nTPM: 5.8
2620 Female, age 94, left hemisphere 20.5
1891 Female, age 85, both hemispheres 7.2
2861 Female, age 67, both hemispheres 4.9
1867 Male, age 76, both hemispheres 2.5
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 9.5
2692 Male, age 74, both hemispheres 17.5
2532 Female, age 72, left hemisphere 16.9
2693 Female, age 94, both hemispheres 12.1
1990 Female, age 91, right hemisphere 12.0
2622 Female, age 67, right hemisphere 10.5
2018 Male, age 76, both hemispheres 8.3
1933 Female, age 85, both hemispheres 7.7
1850 Male, age 80, both hemispheres 5.3
2245 Female, age 91, both hemispheres 3.8
2250 Female, age 67, right hemisphere 0.7
Perirhinal gyrus
nTPM: 2.9
2848 Male, age 76, right hemisphere 5.2
2521 Female, age 94, right hemisphere 4.3
1794 Male, age 80, right hemisphere 3.8
1847 Female, age 91, left hemisphere 1.5
1841 Female, age 85, right hemisphere 0.0
Subiculum
nTPM: 11.6
2042 Male, age 76, both hemispheres 20.5
1901 Male, age 80, both hemispheres 16.5
2619 Male, age 74, both hemispheres 12.2
1977 Female, age 85, both hemispheres 9.7
2438 Female, age 94, left hemisphere 6.6
2729 Female, age 91, right hemisphere 4.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.5
Samples: 197

Max nTPM: 207.3
Min nTPM: 5.5
Std nTPM: 23.8
Median nTPM: 45.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 207.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 141.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 131.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 123.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 112.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 108.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 103.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 99.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 97.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 94.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 89.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.5
FF:10153-102I9 76 years, female 50.6
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.9
Samples: 4

Max nTPM: 60.1
Min nTPM: 32.5
Sample A Female 54.2
Sample B Female 44.8
Sample C Male 60.1
Sample D Male 32.5
Entorhinal cortex
nTPM: 58.1
Samples: 4

Max nTPM: 63.7
Min nTPM: 51.6
Sample A Female 54.7
Sample B Female 51.6
Sample C Male 63.7
Sample D Male 62.5
Subiculum
nTPM: 55.0
Samples: 4

Max nTPM: 73.1
Min nTPM: 47.5
Sample A Female 73.1
Sample B Female 50.3
Sample C Male 49.0
Sample D Male 47.5
Ventral hippocampus
nTPM: 46.3
Samples: 4

Max nTPM: 59.1
Min nTPM: 33.2
Sample A Female 40.8
Sample B Female 33.2
Sample C Male 59.1
Sample D Male 52.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.0
Samples: 4

Max nTPM: 85.8
Min nTPM: 69.9
Sample A Male 69.9
Sample B Male 77.7
Sample C Female 70.6
Sample D Female 85.8
Hippocampal formation
nTPM: 54.8
Samples: 4

Max nTPM: 57.3
Min nTPM: 53.3
Sample A Male 54.1
Sample B Male 54.5
Sample C Female 53.3
Sample D Female 57.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.