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PSMB3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:74.4 nTPM
HPA:74.4 nTPM
GTEx:92.8 nTPM
FANTOM5:49.7 Scaled Tags Per Million
Pig:67.4 nTPM
Mouse:229.4 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042775Antibody HPA048147
Glial cells Not detectedNot detected
Neuronal cells LowHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.4
Sample id Sample description nTPM
Hippocampus
nTPM: 67.0
2621 Female, age 67, right hemisphere 74.8
1855 Male, age 76, left hemisphere 72.8
1898 Male, age 80, left hemisphere 68.6
1911 Female, age 85, right hemisphere 62.8
2529 Female, age 94, left hemisphere 62.3
2148 Female, age 91, left hemisphere 60.6
Dentate gyrus
nTPM: 74.4
2530 Female, age 94, left hemisphere 127.0
1927 Female, age 91, both hemispheres 70.5
2010 Male, age 76, both hemispheres 67.7
2246 Female, age 85, both hemispheres 62.6
2528 Male, age 74, both hemispheres 62.6
2531 Female, age 67, both hemispheres 55.7
Entorhinal gyrus
nTPM: 64.2
1938 Female, age 85, left hemisphere 73.4
1787 Male, age 76, left hemisphere 67.2
2117 Female, age 91, right hemisphere 66.0
2764 Male, age 80, right hemisphere 64.8
2613 Female, age 94, left hemisphere 58.0
2686 Male, age 75, right hemisphere 56.1
Hippocampus, CA1
nTPM: 64.5
2749 Male, age 80, left hemisphere 75.1
1873 Female, age 85, both hemispheres 69.1
2045 Male, age 76, both hemispheres 60.7
2527 Male, age 74, both hemispheres 58.9
2082 Female, age 91, right hemisphere 58.8
Hippocampus, CA2
nTPM: 67.7
2249 Male, age 74, both hemispheres 92.1
1892 Male, age 76, both hemispheres 67.3
1963 Male, age 80, left hemisphere 64.3
2113 Female, age 91, right hemisphere 63.6
1940 Female, age 85, left hemisphere 60.6
2437 Female, age 94, left hemisphere 58.0
Hippocampus, CA3
nTPM: 65.3
2436 Male, age 74, both hemispheres 80.8
1867 Male, age 76, both hemispheres 68.2
1891 Female, age 85, both hemispheres 65.4
2137 Male, age 80, left hemisphere 64.0
2620 Female, age 94, left hemisphere 58.0
2861 Female, age 67, both hemispheres 55.6
Parahippocampal cortex
nTPM: 64.2
1933 Female, age 85, both hemispheres 76.1
2532 Female, age 72, left hemisphere 70.8
2245 Female, age 91, both hemispheres 68.7
1850 Male, age 80, both hemispheres 67.4
2018 Male, age 76, both hemispheres 66.3
1990 Female, age 91, right hemisphere 63.4
2250 Female, age 67, right hemisphere 58.8
2693 Female, age 94, both hemispheres 58.0
2692 Male, age 74, both hemispheres 56.8
2622 Female, age 67, right hemisphere 55.6
Perirhinal gyrus
nTPM: 66.8
1847 Female, age 91, left hemisphere 69.7
1841 Female, age 85, right hemisphere 68.5
1794 Male, age 80, right hemisphere 68.1
2521 Female, age 94, right hemisphere 66.6
2848 Male, age 76, right hemisphere 61.2
Subiculum
nTPM: 62.0
1901 Male, age 80, both hemispheres 71.1
2729 Female, age 91, right hemisphere 63.9
1977 Female, age 85, both hemispheres 60.6
2042 Male, age 76, both hemispheres 59.4
2619 Male, age 74, both hemispheres 58.8
2438 Female, age 94, left hemisphere 58.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 92.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 92.8
Samples: 197

Max nTPM: 194.7
Min nTPM: 46.4
Std nTPM: 27.1
Median nTPM: 88.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 194.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 188.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 186.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 179.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 177.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 153.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 148.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 147.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 144.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 142.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 141.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.7
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 67.4
Samples: 4

Max nTPM: 94.1
Min nTPM: 49.3
Sample A Female 94.1
Sample B Female 65.7
Sample C Male 60.6
Sample D Male 49.3
Entorhinal cortex
nTPM: 51.4
Samples: 4

Max nTPM: 60.5
Min nTPM: 39.5
Sample A Female 54.1
Sample B Female 60.5
Sample C Male 51.6
Sample D Male 39.5
Subiculum
nTPM: 49.6
Samples: 4

Max nTPM: 69.7
Min nTPM: 41.0
Sample A Female 69.7
Sample B Female 43.8
Sample C Male 41.0
Sample D Male 44.0
Ventral hippocampus
nTPM: 60.8
Samples: 4

Max nTPM: 70.2
Min nTPM: 41.7
Sample A Female 70.2
Sample B Female 41.7
Sample C Male 67.3
Sample D Male 63.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 229.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 203.6
Samples: 4

Max nTPM: 211.1
Min nTPM: 193.7
Sample A Male 193.7
Sample B Male 211.1
Sample C Female 209.7
Sample D Female 200.0
Hippocampal formation
nTPM: 229.4
Samples: 4

Max nTPM: 257.5
Min nTPM: 207.7
Sample A Male 257.5
Sample B Male 207.7
Sample C Female 227.4
Sample D Female 225.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
634449 Antisense, RP_040907_02_H10, Mouse strain C57BL/6J (56 days, male) 4.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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