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TMEM272
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.9 nTPM
HPA:15.9 nTPM
GTEx:16.4 nTPM
FANTOM5:51.9 Scaled Tags Per Million
Pig:9.1 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 11.5
1857 Female, age 85, left hemisphere 18.8
1854 Male, age 80, left hemisphere 18.0
2289 Male, age 61, right hemisphere 14.4
2290 Female, age 72, unknown 10.8
2846 Female, age 79, unknown 10.1
2288 Male, age 75, left hemisphere 8.6
1781 Male, age 74, unknown 5.7
2481 Female, age 94, left hemisphere 5.4
Claustrum
nTPM: 2.0
2196 Female, age 79, unknown 4.7
2568 Male, age 61, both hemispheres 2.9
2392 Female, age 94, both hemispheres 2.7
2284 Female, age 91, both hemispheres 2.1
2198 Male, age 80, both hemispheres 1.9
2645 Female, age 72, unknown 1.7
2491 Male, age 75, both hemispheres 1.1
1956 Male, age 74, unknown 1.0
2292 Female, age 85, both hemispheres 0.3
Globus pallidus, externus
nTPM: 1.1
2646 Male, age 61, right hemisphere 3.1
2395 Male, age 75, both hemispheres 1.3
2567 Female, age 72, unknown 0.4
2772 Female, age 79, unknown 0.4
1996 Male, age 80, right hemisphere 0.1
Globus pallidus, internus
nTPM: 0.6
2483 Female, age 94, right hemisphere 3.2
2566 Female, age 72, unknown 0.6
2111 Female, age 85, right hemisphere 0.3
1818 Male, age 74, unknown 0.2
2037 Male, age 80, right hemisphere 0.2
2287 Male, age 75, right hemisphere 0.1
2778 Female, age 91, both hemispheres 0.0
Nucleus accumbens
nTPM: 15.9
2824 Male, age 61, right hemisphere 38.4
1806 Female, age 85, left hemisphere 18.1
1856 Female, age 91, right hemisphere 17.4
1783 Male, age 74, unknown 16.6
2732 Male, age 80, right hemisphere 13.9
2698 Female, age 72, unknown 11.1
2286 Male, age 75, left hemisphere 7.9
2391 Female, age 94, left hemisphere 3.8
Nucleus basalis of Meynert
nTPM: 9.4
2393 Male, age 80, right hemisphere 16.4
2484 Female, age 94, left hemisphere 11.8
2821 Male, age 75, both hemispheres 5.1
2569 Male, age 61, both hemispheres 4.2
Nucleus of the diagonal band
nTPM: 4.3
1979 Male, age 74, unknown 14.5
1812 Female, age 91, both hemispheres 2.0
2029 Male, age 61, right hemisphere 1.8
2195 Female, age 85, both hemispheres 1.7
2775 Male, age 80, right hemisphere 1.2
Olfactory tubercle
nTPM: 1.3
2487 Female, age 94, left hemisphere 2.1
1998 Female, age 91, both hemispheres 1.4
1846 Male, age 80, right hemisphere 1.0
2856 Male, age 75, right hemisphere 0.9
Putamen
nTPM: 14.1
1838 Male, age 80, right hemisphere 21.8
2489 Female, age 72, unknown 17.0
2466 Female, age 79, unknown 16.1
1829 Male, age 74, unknown 15.8
1937 Female, age 91, right hemisphere 11.0
2647 Male, age 75, left hemisphere 10.6
2482 Female, age 94, left hemisphere 6.0
Septal nuclei
nTPM: 3.2
2394 Male, age 61, left hemisphere 5.6
2059 Female, age 85, both hemispheres 5.2
2199 Male, age 80, right hemisphere 4.8
1960 Male, age 74, unknown 1.9
2009 Female, age 91, both hemispheres 1.8
2031 Female, age 72, unknown 1.5
2629 Female, age 94, right hemisphere 1.4

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 16.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 6.3
Samples: 246

Max nTPM: 36.8
Min nTPM: 0.2
Std nTPM: 5.8
Median nTPM: 4.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 36.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 32.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 30.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 29.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 21.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 21.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 21.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 20.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 20.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 18.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 18.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 16.4
Samples: 246

Max nTPM: 131.2
Min nTPM: 0.2
Std nTPM: 15.2
Median nTPM: 15.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 131.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 124.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 59.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 48.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 47.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 45.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 45.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 45.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 44.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 40.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 39.1
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Brain - Putamen (basal ganglia)
Average nTPM: 6.1
Samples: 205

Max nTPM: 36.6
Min nTPM: 0.2
Std nTPM: 5.7
Median nTPM: 4.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 36.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 24.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 24.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 24.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 23.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 21.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 21.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 20.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 20.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 19.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 17.9
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 51.9
FF:10164-103B2 76 years, female 51.9
Globus pallidus
Scaled Tags Per Million: 5.8
FF:10175-103C4 60 years, female 7.8
FF:10161-103A8 76 years, female 3.7
Nucleus accumbens
Scaled Tags Per Million: 13.2
FF:10037-101F1 23-56 years, mixed 13.2
Putamen
Scaled Tags Per Million: 46.2
FF:10176-103C5 60 years, female 46.2

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Caudate
nTPM: 9.1
Samples: 4

Max nTPM: 10.5
Min nTPM: 8.1
Sample A Female 9.6
Sample B Female 10.5
Sample C Male 8.3
Sample D Male 8.1
Putamen
nTPM: 8.0
Samples: 4

Max nTPM: 13.3
Min nTPM: 2.4
Sample A Female 2.4
Sample B Female 11.1
Sample C Male 5.3
Sample D Male 13.3
Septum
nTPM: 4.1
Samples: 4

Max nTPM: 6.5
Min nTPM: 2.2
Sample A Female 6.5
Sample B Female 3.3
Sample C Male 4.4
Sample D Male 2.2
Ventral pallidum
nTPM: 6.5
Samples: 4

Max nTPM: 13.8
Min nTPM: 2.4
Sample A Female 13.8
Sample B Female 2.4
Sample C Male 2.6
Sample D Male 7.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.