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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:50.6 nTPM
HPA:50.6 nTPM
GTEx:35.8 nTPM
FANTOM5:161.6 Scaled Tags Per Million
Pig:80.4 nTPM
Mouse:90.9 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008287
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.6
Sample id Sample description nTPM
Hippocampus
nTPM: 46.7
1855 Male, age 76, left hemisphere 52.2
1898 Male, age 80, left hemisphere 48.9
2148 Female, age 91, left hemisphere 46.9
2621 Female, age 67, right hemisphere 45.7
2529 Female, age 94, left hemisphere 44.5
1911 Female, age 85, right hemisphere 42.2
Dentate gyrus
nTPM: 46.0
2531 Female, age 67, both hemispheres 48.9
2246 Female, age 85, both hemispheres 47.0
2528 Male, age 74, both hemispheres 46.5
1927 Female, age 91, both hemispheres 46.3
2530 Female, age 94, left hemisphere 45.0
2010 Male, age 76, both hemispheres 42.2
Entorhinal gyrus
nTPM: 46.3
2764 Male, age 80, right hemisphere 52.3
1938 Female, age 85, left hemisphere 46.3
2613 Female, age 94, left hemisphere 45.7
1787 Male, age 76, left hemisphere 45.3
2117 Female, age 91, right hemisphere 44.4
2686 Male, age 75, right hemisphere 44.0
Hippocampus, CA1
nTPM: 48.6
2749 Male, age 80, left hemisphere 56.6
2082 Female, age 91, right hemisphere 49.8
2527 Male, age 74, both hemispheres 47.2
2045 Male, age 76, both hemispheres 44.9
1873 Female, age 85, both hemispheres 44.5
Hippocampus, CA2
nTPM: 45.9
1892 Male, age 76, both hemispheres 49.3
2113 Female, age 91, right hemisphere 46.1
1940 Female, age 85, left hemisphere 45.7
2249 Male, age 74, both hemispheres 44.9
1963 Male, age 80, left hemisphere 44.7
2437 Female, age 94, left hemisphere 44.6
Hippocampus, CA3
nTPM: 48.5
2137 Male, age 80, left hemisphere 54.1
2861 Female, age 67, both hemispheres 51.9
2620 Female, age 94, left hemisphere 51.8
2436 Male, age 74, both hemispheres 46.2
1867 Male, age 76, both hemispheres 45.0
1891 Female, age 85, both hemispheres 42.2
Parahippocampal cortex
nTPM: 45.9
1850 Male, age 80, both hemispheres 50.8
2622 Female, age 67, right hemisphere 48.5
2245 Female, age 91, both hemispheres 47.2
2532 Female, age 72, left hemisphere 45.4
1933 Female, age 85, both hemispheres 45.2
1990 Female, age 91, right hemisphere 45.0
2018 Male, age 76, both hemispheres 44.9
2692 Male, age 74, both hemispheres 44.9
2693 Female, age 94, both hemispheres 44.0
2250 Female, age 67, right hemisphere 43.1
Perirhinal gyrus
nTPM: 50.6
1794 Male, age 80, right hemisphere 55.9
1847 Female, age 91, left hemisphere 51.6
2848 Male, age 76, right hemisphere 49.1
1841 Female, age 85, right hemisphere 48.4
2521 Female, age 94, right hemisphere 47.9
Subiculum
nTPM: 45.7
2619 Male, age 74, both hemispheres 48.4
2438 Female, age 94, left hemisphere 47.9
1901 Male, age 80, both hemispheres 46.3
2729 Female, age 91, right hemisphere 44.4
1977 Female, age 85, both hemispheres 43.8
2042 Male, age 76, both hemispheres 43.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.8
Samples: 197

Max nTPM: 73.7
Min nTPM: 10.1
Std nTPM: 11.3
Median nTPM: 34.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 73.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 72.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 72.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 67.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 63.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 62.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 60.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 59.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 59.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 57.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 55.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 161.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 161.6
FF:10169-103B7 60 years, female 202.9
FF:10153-102I9 76 years, female 120.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 80.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.2
Samples: 4

Max nTPM: 98.3
Min nTPM: 61.5
Sample A Female 98.3
Sample B Female 80.8
Sample C Male 76.3
Sample D Male 61.5
Entorhinal cortex
nTPM: 67.2
Samples: 4

Max nTPM: 69.7
Min nTPM: 63.5
Sample A Female 69.7
Sample B Female 67.3
Sample C Male 68.1
Sample D Male 63.5
Subiculum
nTPM: 72.9
Samples: 4

Max nTPM: 90.1
Min nTPM: 59.1
Sample A Female 90.1
Sample B Female 71.1
Sample C Male 71.1
Sample D Male 59.1
Ventral hippocampus
nTPM: 80.4
Samples: 4

Max nTPM: 101.4
Min nTPM: 59.8
Sample A Female 83.3
Sample B Female 59.8
Sample C Male 101.4
Sample D Male 77.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 80.1
Samples: 4

Max nTPM: 87.6
Min nTPM: 70.2
Sample A Male 79.4
Sample B Male 70.2
Sample C Female 87.6
Sample D Female 83.2
Hippocampal formation
nTPM: 90.9
Samples: 4

Max nTPM: 98.0
Min nTPM: 84.7
Sample A Male 84.7
Sample B Male 85.3
Sample C Female 95.6
Sample D Female 98.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
68797489 Antisense, RP_050125_02_C06, Mouse strain C57BL/6J (56 days, male) 5.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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