ABOUTMENU
HELP
NEWS
MATK
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.9 nTPM
HPA:25.9 nTPM
GTEx:56.0 nTPM
FANTOM5:23.6 Scaled Tags Per Million
Pig:12.0 nTPM
Mouse:90.5 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004847
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.9
Sample id Sample description nTPM
Hippocampus
nTPM: 23.0
2621 Female, age 67, right hemisphere 27.3
2148 Female, age 91, left hemisphere 25.3
2529 Female, age 94, left hemisphere 24.6
1898 Male, age 80, left hemisphere 24.0
1911 Female, age 85, right hemisphere 20.7
1855 Male, age 76, left hemisphere 16.3
Dentate gyrus
nTPM: 23.4
2531 Female, age 67, both hemispheres 29.4
1927 Female, age 91, both hemispheres 26.3
2530 Female, age 94, left hemisphere 26.1
2528 Male, age 74, both hemispheres 23.9
2246 Female, age 85, both hemispheres 20.2
2010 Male, age 76, both hemispheres 14.6
Entorhinal gyrus
nTPM: 23.0
2613 Female, age 94, left hemisphere 38.1
2686 Male, age 75, right hemisphere 25.5
2764 Male, age 80, right hemisphere 23.4
1787 Male, age 76, left hemisphere 19.0
1938 Female, age 85, left hemisphere 18.6
2117 Female, age 91, right hemisphere 13.4
Hippocampus, CA1
nTPM: 23.5
2749 Male, age 80, left hemisphere 34.9
2527 Male, age 74, both hemispheres 31.0
1873 Female, age 85, both hemispheres 20.3
2082 Female, age 91, right hemisphere 17.7
2045 Male, age 76, both hemispheres 13.8
Hippocampus, CA2
nTPM: 23.2
2437 Female, age 94, left hemisphere 32.7
1963 Male, age 80, left hemisphere 31.5
1892 Male, age 76, both hemispheres 24.6
2249 Male, age 74, both hemispheres 21.6
2113 Female, age 91, right hemisphere 17.3
1940 Female, age 85, left hemisphere 11.4
Hippocampus, CA3
nTPM: 25.9
2861 Female, age 67, both hemispheres 36.8
2137 Male, age 80, left hemisphere 33.1
2620 Female, age 94, left hemisphere 30.9
1867 Male, age 76, both hemispheres 19.9
2436 Male, age 74, both hemispheres 17.6
1891 Female, age 85, both hemispheres 17.2
Parahippocampal cortex
nTPM: 20.6
2245 Female, age 91, both hemispheres 27.4
2622 Female, age 67, right hemisphere 24.3
1990 Female, age 91, right hemisphere 23.2
2693 Female, age 94, both hemispheres 22.3
2250 Female, age 67, right hemisphere 22.0
2692 Male, age 74, both hemispheres 20.6
2532 Female, age 72, left hemisphere 19.0
1933 Female, age 85, both hemispheres 16.1
1850 Male, age 80, both hemispheres 15.8
2018 Male, age 76, both hemispheres 15.2
Perirhinal gyrus
nTPM: 19.4
1847 Female, age 91, left hemisphere 23.8
2521 Female, age 94, right hemisphere 20.5
1794 Male, age 80, right hemisphere 18.9
1841 Female, age 85, right hemisphere 17.2
2848 Male, age 76, right hemisphere 16.6
Subiculum
nTPM: 20.3
2438 Female, age 94, left hemisphere 25.1
2619 Male, age 74, both hemispheres 24.8
1901 Male, age 80, both hemispheres 20.8
1977 Female, age 85, both hemispheres 19.6
2729 Female, age 91, right hemisphere 17.2
2042 Male, age 76, both hemispheres 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.0
Samples: 197

Max nTPM: 157.9
Min nTPM: 3.7
Std nTPM: 28.8
Median nTPM: 55.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 157.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 145.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 143.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 139.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 111.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 110.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 108.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 106.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 106.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 105.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 104.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.6
FF:10153-102I9 76 years, female 28.3
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 14.9
Min nTPM: 7.4
Sample A Female 11.1
Sample B Female 14.6
Sample C Male 7.4
Sample D Male 14.9
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.1
Sample A Female 9.8
Sample B Female 10.8
Sample C Male 13.6
Sample D Male 9.1
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 15.7
Min nTPM: 7.6
Sample A Female 15.7
Sample B Female 10.8
Sample C Male 9.3
Sample D Male 7.6
Ventral hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 13.3
Min nTPM: 7.6
Sample A Female 7.6
Sample B Female 11.5
Sample C Male 13.3
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.1
Samples: 4

Max nTPM: 88.3
Min nTPM: 75.1
Sample A Male 84.8
Sample B Male 88.3
Sample C Female 80.1
Sample D Female 75.1
Hippocampal formation
nTPM: 90.6
Samples: 4

Max nTPM: 93.6
Min nTPM: 87.0
Sample A Male 91.3
Sample B Male 93.6
Sample C Female 87.0
Sample D Female 90.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
76135823 Antisense, RP_060711_04_D03, Mouse strain C57BL/6J (56 days, male) 18.0
69752089 Antisense, RP_050505_01_B03, Mouse strain C57BL/6J (56 days, male) 17.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.