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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		3.753
RNA expressioni
Consensus:21.7 nTPM
HPA:21.7 nTPM
GTEx:17.5 nTPM
FANTOM5:80.8 Scaled Tags Per Million
Pig:17.0 nTPM
Mouse:6.3 nTPM
Allen mouse:0.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA030775
Amygdala mean intensity 3.753
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 0.025
Basal medial amygdaloid nucleus 0.595
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 0.036
Cortical amygdala 0.374
Central amygdala 2.512
Medial amygdaloid nucleus 3.753

AMYGDALA - HPA Brain RNA-seq
Max nTPM 21.7
Sample id Sample description nTPM
Amygdala
nTPM: 21.7
1987 Female, age 91, left hemisphere 26.6
2514 Male, age 75, right hemisphere 24.8
2517 Female, age 94, left hemisphere 21.9
2814 Male, age 76, right hemisphere 17.6
2695 Female, age 67, right hemisphere 17.5
Basal amygdala
nTPM: 21.3
2609 Male, age 75, right hemisphere 26.4
2243 Female, age 91, right hemisphere 22.3
2110 Male, age 80, left hemisphere 21.1
2685 Female, age 94, left hemisphere 20.3
1955 Male, age 76, both hemispheres 19.4
2827 Female, age 67, right hemisphere 18.1
Central amygdala
nTPM: 21.4
2701 Female, age 91, right hemisphere 26.0
2239 Male, age 80, left hemisphere 23.3
2515 Male, age 75, right hemisphere 22.5
2826 Female, age 94, left hemisphere 18.2
1905 Male, age 76, both hemispheres 17.1
Corticomedial amygdala
nTPM: 20.9
2428 Male, age 75, right hemisphere 23.2
2242 Female, age 91, right hemisphere 22.5
2829 Male, age 80, left hemisphere 21.9
2240 Male, age 76, both hemispheres 20.1
2429 Female, age 94, left hemisphere 19.3
2535 Female, age 67, right hemisphere 18.2
Lateral amygdala
nTPM: 20.7
2255 Female, age 91, right hemisphere 25.7
2516 Male, age 75, right hemisphere 24.5
2256 Male, age 80, left hemisphere 23.3
2534 Female, age 94, left hemisphere 17.0
2830 Female, age 67, right hemisphere 16.9
1883 Male, age 76, both hemispheres 16.8
Stria terminalis, bed nucleus
nTPM: 19.0
2201 Male, age 74, unknown 19.5
1974 Female, age 91, both hemispheres 19.4
2486 Female, age 94, both hemispheres 18.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 17.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 17.5
Samples: 152

Max nTPM: 44.5
Min nTPM: 1.1
Std nTPM: 7.6
Median nTPM: 16.9
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 44.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 40.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 39.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 37.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 30.9
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 30.4
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 30.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 29.7
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 29.6
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 29.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 29.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 80.8
FF:10151-102I7 76 years, female 80.8

AMYGDALA - Pig RNA-seqi
Average nTPM 17.0
Pig sample Sample description nTPM
Amygdala
nTPM: 17.0
Samples: 4

Max nTPM: 19.0
Min nTPM: 15.5
Sample A Female 19.0
Sample B Female 16.9
Sample C Male 15.5
Sample D Male 16.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 6.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 6.3
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.6
Sample A Male 6.0
Sample B Male 5.9
Sample C Female 5.6
Sample D Female 7.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.3
79677341 Antisense, RP_071204_01_F02, Mouse strain C57BL/6J (56 days, male) 0.6
764 Antisense, RP_Baylor_253956, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.