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SLC6A13
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.2 nTPM
HPA:12.2 nTPM
GTEx:8.1 nTPM
FANTOM5:4.2 Scaled Tags Per Million
Pig:9.5 nTPM
Mouse:15.0 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1911 Female, age 85, right hemisphere 12.2
2529 Female, age 94, left hemisphere 11.7
2148 Female, age 91, left hemisphere 11.4
1855 Male, age 76, left hemisphere 11.1
2621 Female, age 67, right hemisphere 10.9
1898 Male, age 80, left hemisphere 10.7
Dentate gyrus
nTPM: 11.2
2246 Female, age 85, both hemispheres 11.9
2530 Female, age 94, left hemisphere 11.8
2528 Male, age 74, both hemispheres 11.7
1927 Female, age 91, both hemispheres 11.1
2531 Female, age 67, both hemispheres 10.9
2010 Male, age 76, both hemispheres 10.0
Entorhinal gyrus
nTPM: 12.2
2686 Male, age 75, right hemisphere 15.6
1787 Male, age 76, left hemisphere 12.6
2613 Female, age 94, left hemisphere 12.6
1938 Female, age 85, left hemisphere 11.0
2764 Male, age 80, right hemisphere 10.9
2117 Female, age 91, right hemisphere 10.4
Hippocampus, CA1
nTPM: 11.3
1873 Female, age 85, both hemispheres 11.6
2082 Female, age 91, right hemisphere 11.6
2527 Male, age 74, both hemispheres 11.3
2045 Male, age 76, both hemispheres 10.9
2749 Male, age 80, left hemisphere 10.9
Hippocampus, CA2
nTPM: 11.2
1940 Female, age 85, left hemisphere 12.2
2113 Female, age 91, right hemisphere 12.1
1963 Male, age 80, left hemisphere 11.1
2437 Female, age 94, left hemisphere 11.0
1892 Male, age 76, both hemispheres 10.5
2249 Male, age 74, both hemispheres 10.4
Hippocampus, CA3
nTPM: 11.4
1891 Female, age 85, both hemispheres 12.3
2861 Female, age 67, both hemispheres 12.1
2137 Male, age 80, left hemisphere 11.9
1867 Male, age 76, both hemispheres 11.3
2620 Female, age 94, left hemisphere 10.9
2436 Male, age 74, both hemispheres 9.9
Parahippocampal cortex
nTPM: 12.0
1990 Female, age 91, right hemisphere 13.8
2622 Female, age 67, right hemisphere 13.2
2018 Male, age 76, both hemispheres 13.1
2692 Male, age 74, both hemispheres 12.0
1850 Male, age 80, both hemispheres 11.8
2693 Female, age 94, both hemispheres 11.8
2245 Female, age 91, both hemispheres 11.3
2532 Female, age 72, left hemisphere 11.3
1933 Female, age 85, both hemispheres 10.8
2250 Female, age 67, right hemisphere 10.6
Perirhinal gyrus
nTPM: 12.2
2521 Female, age 94, right hemisphere 14.7
1841 Female, age 85, right hemisphere 12.1
1794 Male, age 80, right hemisphere 12.0
2848 Male, age 76, right hemisphere 11.2
1847 Female, age 91, left hemisphere 11.1
Subiculum
nTPM: 11.4
2619 Male, age 74, both hemispheres 12.7
2729 Female, age 91, right hemisphere 12.2
1901 Male, age 80, both hemispheres 11.2
2438 Female, age 94, left hemisphere 11.2
2042 Male, age 76, both hemispheres 10.5
1977 Female, age 85, both hemispheres 10.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.1
Samples: 197

Max nTPM: 19.0
Min nTPM: 0.7
Std nTPM: 3.9
Median nTPM: 7.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 19.0
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 18.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 18.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 18.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 17.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 16.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 16.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 16.5
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 16.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 16.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 16.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.2
FF:10153-102I9 76 years, female 5.3
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.1
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.1
Sample A Female 2.1
Sample B Female 3.0
Sample C Male 3.7
Sample D Male 3.6
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 13.5
Min nTPM: 5.3
Sample A Female 13.5
Sample B Female 8.6
Sample C Male 6.9
Sample D Male 5.3
Subiculum
nTPM: 9.5
Samples: 4

Max nTPM: 19.8
Min nTPM: 2.8
Sample A Female 6.3
Sample B Female 2.8
Sample C Male 9.1
Sample D Male 19.8
Ventral hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 5.8
Min nTPM: 3.0
Sample A Female 3.0
Sample B Female 3.9
Sample C Male 5.8
Sample D Male 3.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 19.2
Min nTPM: 11.5
Sample A Male 11.5
Sample B Male 12.3
Sample C Female 17.1
Sample D Female 19.2
Hippocampal formation
nTPM: 6.7
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.3
Sample A Male 7.2
Sample B Male 6.9
Sample C Female 5.3
Sample D Female 7.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
78534514 Antisense, RP_070620_01_B04, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

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