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PTBP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:29.9 nTPM
HPA:29.9 nTPM
GTEx:26.3 nTPM
FANTOM5:47.9 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:14.0 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB013507
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.9
Sample id Sample description nTPM
Hippocampus
nTPM: 28.8
1855 Male, age 76, left hemisphere 30.1
2621 Female, age 67, right hemisphere 30.1
1911 Female, age 85, right hemisphere 28.8
2529 Female, age 94, left hemisphere 28.5
1898 Male, age 80, left hemisphere 27.9
2148 Female, age 91, left hemisphere 27.5
Dentate gyrus
nTPM: 28.3
2531 Female, age 67, both hemispheres 31.3
2530 Female, age 94, left hemisphere 31.1
2528 Male, age 74, both hemispheres 29.4
2010 Male, age 76, both hemispheres 28.5
2246 Female, age 85, both hemispheres 28.4
1927 Female, age 91, both hemispheres 21.1
Entorhinal gyrus
nTPM: 26.4
1787 Male, age 76, left hemisphere 28.9
2117 Female, age 91, right hemisphere 28.2
2686 Male, age 75, right hemisphere 27.0
2613 Female, age 94, left hemisphere 25.5
1938 Female, age 85, left hemisphere 24.8
2764 Male, age 80, right hemisphere 24.1
Hippocampus, CA1
nTPM: 27.3
2045 Male, age 76, both hemispheres 30.0
2082 Female, age 91, right hemisphere 29.8
2527 Male, age 74, both hemispheres 28.7
1873 Female, age 85, both hemispheres 27.4
2749 Male, age 80, left hemisphere 20.6
Hippocampus, CA2
nTPM: 27.6
1940 Female, age 85, left hemisphere 31.0
2113 Female, age 91, right hemisphere 30.4
2437 Female, age 94, left hemisphere 29.1
2249 Male, age 74, both hemispheres 27.8
1963 Male, age 80, left hemisphere 24.7
1892 Male, age 76, both hemispheres 22.8
Hippocampus, CA3
nTPM: 28.6
2436 Male, age 74, both hemispheres 34.5
2861 Female, age 67, both hemispheres 31.4
2620 Female, age 94, left hemisphere 29.7
1867 Male, age 76, both hemispheres 26.5
1891 Female, age 85, both hemispheres 26.3
2137 Male, age 80, left hemisphere 22.8
Parahippocampal cortex
nTPM: 27.6
2622 Female, age 67, right hemisphere 33.1
2532 Female, age 72, left hemisphere 30.2
2250 Female, age 67, right hemisphere 29.5
2018 Male, age 76, both hemispheres 28.0
2692 Male, age 74, both hemispheres 27.5
1990 Female, age 91, right hemisphere 26.6
2245 Female, age 91, both hemispheres 26.4
1850 Male, age 80, both hemispheres 25.2
2693 Female, age 94, both hemispheres 25.2
1933 Female, age 85, both hemispheres 24.2
Perirhinal gyrus
nTPM: 24.8
2848 Male, age 76, right hemisphere 26.9
1841 Female, age 85, right hemisphere 25.7
2521 Female, age 94, right hemisphere 24.4
1794 Male, age 80, right hemisphere 23.6
1847 Female, age 91, left hemisphere 23.3
Subiculum
nTPM: 29.9
2438 Female, age 94, left hemisphere 33.9
2619 Male, age 74, both hemispheres 31.0
2729 Female, age 91, right hemisphere 30.9
2042 Male, age 76, both hemispheres 30.5
1901 Male, age 80, both hemispheres 27.5
1977 Female, age 85, both hemispheres 25.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.3
Samples: 197

Max nTPM: 69.6
Min nTPM: 10.5
Std nTPM: 9.4
Median nTPM: 25.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 69.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 68.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 54.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 51.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 47.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 46.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 45.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 44.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 44.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 42.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 42.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.9
FF:10153-102I9 76 years, female 60.3
FF:10169-103B7 60 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 24.3
Min nTPM: 17.3
Sample A Female 23.8
Sample B Female 18.9
Sample C Male 24.3
Sample D Male 17.3
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 21.8
Min nTPM: 15.8
Sample A Female 21.8
Sample B Female 18.8
Sample C Male 19.7
Sample D Male 15.8
Subiculum
nTPM: 21.1
Samples: 4

Max nTPM: 23.1
Min nTPM: 18.9
Sample A Female 23.1
Sample B Female 18.9
Sample C Male 20.1
Sample D Male 22.3
Ventral hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 29.0
Min nTPM: 17.6
Sample A Female 20.1
Sample B Female 17.6
Sample C Male 29.0
Sample D Male 20.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.0
Sample A Male 15.2
Sample B Male 15.0
Sample C Female 13.8
Sample D Female 12.0
Hippocampal formation
nTPM: 12.6
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.3
Sample A Male 11.3
Sample B Male 13.2
Sample C Female 12.3
Sample D Female 13.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
356857 Antisense, RP_040617_01_H06, Mouse strain C57BL/6J (56 days, male) 7.4
76081929 Antisense, RP_060626_01_A09, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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