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PPP5C
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:29.8 nTPM
HPA:29.8 nTPM
GTEx:30.2 nTPM
FANTOM5:76.3 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:93.7 nTPM
Allen mouse:13.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029065Antibody HPA056933Antibody CAB022641
Glial cells LowNot detectedLow
Neuronal cells MediumMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
1898 Male, age 80, left hemisphere 28.3
2621 Female, age 67, right hemisphere 27.0
1855 Male, age 76, left hemisphere 26.2
2148 Female, age 91, left hemisphere 23.3
1911 Female, age 85, right hemisphere 22.8
2529 Female, age 94, left hemisphere 22.6
Dentate gyrus
nTPM: 24.2
1927 Female, age 91, both hemispheres 25.8
2010 Male, age 76, both hemispheres 25.5
2246 Female, age 85, both hemispheres 25.0
2530 Female, age 94, left hemisphere 24.2
2531 Female, age 67, both hemispheres 22.6
2528 Male, age 74, both hemispheres 22.2
Entorhinal gyrus
nTPM: 27.5
2764 Male, age 80, right hemisphere 32.0
1938 Female, age 85, left hemisphere 29.0
1787 Male, age 76, left hemisphere 28.9
2613 Female, age 94, left hemisphere 28.0
2117 Female, age 91, right hemisphere 23.8
2686 Male, age 75, right hemisphere 23.2
Hippocampus, CA1
nTPM: 26.3
2749 Male, age 80, left hemisphere 34.0
1873 Female, age 85, both hemispheres 28.0
2527 Male, age 74, both hemispheres 25.9
2082 Female, age 91, right hemisphere 22.2
2045 Male, age 76, both hemispheres 21.7
Hippocampus, CA2
nTPM: 25.7
1892 Male, age 76, both hemispheres 31.5
1963 Male, age 80, left hemisphere 27.2
2249 Male, age 74, both hemispheres 25.5
2437 Female, age 94, left hemisphere 25.3
1940 Female, age 85, left hemisphere 22.6
2113 Female, age 91, right hemisphere 22.0
Hippocampus, CA3
nTPM: 25.7
1867 Male, age 76, both hemispheres 27.4
2137 Male, age 80, left hemisphere 27.4
2436 Male, age 74, both hemispheres 27.0
1891 Female, age 85, both hemispheres 24.4
2620 Female, age 94, left hemisphere 24.0
2861 Female, age 67, both hemispheres 24.0
Parahippocampal cortex
nTPM: 26.3
1850 Male, age 80, both hemispheres 30.6
1933 Female, age 85, both hemispheres 28.0
1990 Female, age 91, right hemisphere 27.5
2245 Female, age 91, both hemispheres 27.0
2532 Female, age 72, left hemisphere 26.6
2250 Female, age 67, right hemisphere 26.3
2692 Male, age 74, both hemispheres 26.0
2622 Female, age 67, right hemisphere 24.8
2693 Female, age 94, both hemispheres 24.2
2018 Male, age 76, both hemispheres 22.1
Perirhinal gyrus
nTPM: 29.8
1847 Female, age 91, left hemisphere 32.9
1794 Male, age 80, right hemisphere 32.4
1841 Female, age 85, right hemisphere 30.0
2848 Male, age 76, right hemisphere 27.1
2521 Female, age 94, right hemisphere 26.7
Subiculum
nTPM: 25.2
1977 Female, age 85, both hemispheres 28.1
2619 Male, age 74, both hemispheres 27.2
1901 Male, age 80, both hemispheres 26.8
2438 Female, age 94, left hemisphere 25.8
2042 Male, age 76, both hemispheres 22.1
2729 Female, age 91, right hemisphere 21.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.2
Samples: 197

Max nTPM: 51.4
Min nTPM: 14.1
Std nTPM: 7.7
Median nTPM: 28.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 51.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 49.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 49.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 47.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 46.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 45.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 45.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 44.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 44.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.3
FF:10169-103B7 60 years, female 86.8
FF:10153-102I9 76 years, female 65.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 27.7
Min nTPM: 17.2
Sample A Female 27.7
Sample B Female 22.7
Sample C Male 21.8
Sample D Male 17.2
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 21.8
Min nTPM: 17.4
Sample A Female 20.7
Sample B Female 21.8
Sample C Male 18.2
Sample D Male 17.4
Subiculum
nTPM: 19.1
Samples: 4

Max nTPM: 23.3
Min nTPM: 17.4
Sample A Female 23.3
Sample B Female 17.5
Sample C Male 18.2
Sample D Male 17.4
Ventral hippocampus
nTPM: 21.5
Samples: 4

Max nTPM: 25.8
Min nTPM: 14.5
Sample A Female 21.6
Sample B Female 14.5
Sample C Male 25.8
Sample D Male 23.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 93.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.7
Samples: 4

Max nTPM: 106.4
Min nTPM: 87.1
Sample A Male 93.9
Sample B Male 106.4
Sample C Female 87.1
Sample D Female 87.4
Hippocampal formation
nTPM: 87.5
Samples: 4

Max nTPM: 93.7
Min nTPM: 83.2
Sample A Male 93.7
Sample B Male 83.2
Sample C Female 83.4
Sample D Female 89.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.8
413805 Antisense, RP_040809_01_F04, Mouse strain C57BL/6J (56 days, male) 13.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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