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CLDN11
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:22.7 nTPM
HPA:22.7 nTPM
GTEx:104.5 nTPM
FANTOM5:202.2 Scaled Tags Per Million
Mouse:272.4 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013166Antibody CAB009789
Glial cells Not detectedMedium
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.0
1911 Female, age 85, right hemisphere 20.9
2529 Female, age 94, left hemisphere 16.0
1898 Male, age 80, left hemisphere 15.4
2621 Female, age 67, right hemisphere 14.8
2148 Female, age 91, left hemisphere 9.4
1855 Male, age 76, left hemisphere 7.6
Dentate gyrus
nTPM: 16.2
2530 Female, age 94, left hemisphere 34.8
2528 Male, age 74, both hemispheres 22.0
2246 Female, age 85, both hemispheres 12.3
2010 Male, age 76, both hemispheres 10.7
2531 Female, age 67, both hemispheres 9.6
1927 Female, age 91, both hemispheres 7.5
Entorhinal gyrus
nTPM: 16.4
2117 Female, age 91, right hemisphere 35.9
2764 Male, age 80, right hemisphere 21.8
1938 Female, age 85, left hemisphere 12.9
1787 Male, age 76, left hemisphere 10.2
2613 Female, age 94, left hemisphere 10.1
2686 Male, age 75, right hemisphere 7.1
Hippocampus, CA1
nTPM: 11.4
2527 Male, age 74, both hemispheres 17.2
2082 Female, age 91, right hemisphere 14.4
1873 Female, age 85, both hemispheres 11.9
2749 Male, age 80, left hemisphere 11.2
2045 Male, age 76, both hemispheres 2.3
Hippocampus, CA2
nTPM: 16.5
2249 Male, age 74, both hemispheres 27.3
1963 Male, age 80, left hemisphere 22.0
1940 Female, age 85, left hemisphere 15.0
2437 Female, age 94, left hemisphere 14.7
2113 Female, age 91, right hemisphere 13.8
1892 Male, age 76, both hemispheres 6.2
Hippocampus, CA3
nTPM: 8.8
1891 Female, age 85, both hemispheres 25.5
2436 Male, age 74, both hemispheres 10.4
1867 Male, age 76, both hemispheres 8.9
2137 Male, age 80, left hemisphere 3.9
2620 Female, age 94, left hemisphere 2.8
2861 Female, age 67, both hemispheres 1.5
Parahippocampal cortex
nTPM: 10.3
2532 Female, age 72, left hemisphere 19.6
1990 Female, age 91, right hemisphere 17.7
2692 Male, age 74, both hemispheres 15.4
1933 Female, age 85, both hemispheres 10.9
1850 Male, age 80, both hemispheres 10.4
2018 Male, age 76, both hemispheres 7.9
2245 Female, age 91, both hemispheres 7.5
2250 Female, age 67, right hemisphere 6.5
2693 Female, age 94, both hemispheres 6.5
2622 Female, age 67, right hemisphere 0.7
Perirhinal gyrus
nTPM: 6.3
1794 Male, age 80, right hemisphere 7.7
2521 Female, age 94, right hemisphere 7.4
1847 Female, age 91, left hemisphere 6.2
2848 Male, age 76, right hemisphere 5.8
1841 Female, age 85, right hemisphere 4.4
Subiculum
nTPM: 22.7
1901 Male, age 80, both hemispheres 32.3
2042 Male, age 76, both hemispheres 31.0
1977 Female, age 85, both hemispheres 26.8
2619 Male, age 74, both hemispheres 16.7
2729 Female, age 91, right hemisphere 15.0
2438 Female, age 94, left hemisphere 14.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 104.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 104.5
Samples: 197

Max nTPM: 464.9
Min nTPM: 5.9
Std nTPM: 85.3
Median nTPM: 78.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 464.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 447.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 356.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 350.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 333.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 332.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 328.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 323.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 289.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 287.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 250.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 202.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 202.2
FF:10153-102I9 76 years, female 242.3
FF:10169-103B7 60 years, female 162.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 272.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.7
Samples: 4

Max nTPM: 165.2
Min nTPM: 58.8
Sample A Male 165.2
Sample B Male 122.5
Sample C Female 140.1
Sample D Female 58.8
Hippocampal formation
nTPM: 272.4
Samples: 4

Max nTPM: 437.6
Min nTPM: 155.2
Sample A Male 155.2
Sample B Male 210.9
Sample C Female 437.6
Sample D Female 285.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
74581223 Antisense, RP_060215_02_G11, Mouse strain C57BL/6J (56 days, male) 7.7
77924438 Antisense, RP_070219_01_H08, Mouse strain C57BL/6J (56 days, male) 6.6
77280580 Antisense, RP_070116_01_G04, Mouse strain C57BL/6J (56 days, male) 5.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.