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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:63.8 nTPM
HPA:63.8 nTPM
GTEx:58.3 nTPM
FANTOM5:659.3 Scaled Tags Per Million
Pig:114.1 nTPM
Mouse:125.5 nTPM
Allen mouse:20.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022952Antibody HPA022970
Glial cells Not detectedNot detected
Neuronal cells MediumMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.8
1898 Male, age 80, left hemisphere 67.0
2529 Female, age 94, left hemisphere 52.3
1855 Male, age 76, left hemisphere 51.2
1911 Female, age 85, right hemisphere 48.3
2148 Female, age 91, left hemisphere 46.3
2621 Female, age 67, right hemisphere 45.6
Dentate gyrus
nTPM: 54.8
1927 Female, age 91, both hemispheres 62.6
2010 Male, age 76, both hemispheres 59.6
2530 Female, age 94, left hemisphere 54.4
2246 Female, age 85, both hemispheres 53.6
2528 Male, age 74, both hemispheres 52.7
2531 Female, age 67, both hemispheres 45.7
Entorhinal gyrus
nTPM: 55.1
2764 Male, age 80, right hemisphere 63.2
1938 Female, age 85, left hemisphere 61.1
2117 Female, age 91, right hemisphere 53.6
2686 Male, age 75, right hemisphere 52.7
1787 Male, age 76, left hemisphere 50.9
2613 Female, age 94, left hemisphere 49.1
Hippocampus, CA1
nTPM: 59.6
2749 Male, age 80, left hemisphere 80.3
1873 Female, age 85, both hemispheres 61.4
2045 Male, age 76, both hemispheres 53.7
2527 Male, age 74, both hemispheres 53.5
2082 Female, age 91, right hemisphere 49.3
Hippocampus, CA2
nTPM: 56.4
1892 Male, age 76, both hemispheres 69.1
1963 Male, age 80, left hemisphere 67.4
2249 Male, age 74, both hemispheres 56.2
2437 Female, age 94, left hemisphere 49.0
1940 Female, age 85, left hemisphere 48.8
2113 Female, age 91, right hemisphere 47.7
Hippocampus, CA3
nTPM: 50.7
2137 Male, age 80, left hemisphere 68.0
1867 Male, age 76, both hemispheres 60.6
1891 Female, age 85, both hemispheres 54.8
2436 Male, age 74, both hemispheres 44.1
2620 Female, age 94, left hemisphere 42.4
2861 Female, age 67, both hemispheres 34.7
Parahippocampal cortex
nTPM: 55.1
1850 Male, age 80, both hemispheres 72.7
1933 Female, age 85, both hemispheres 62.3
1990 Female, age 91, right hemisphere 59.2
2245 Female, age 91, both hemispheres 54.7
2250 Female, age 67, right hemisphere 54.4
2693 Female, age 94, both hemispheres 53.1
2532 Female, age 72, left hemisphere 52.8
2692 Male, age 74, both hemispheres 51.9
2018 Male, age 76, both hemispheres 50.4
2622 Female, age 67, right hemisphere 39.7
Perirhinal gyrus
nTPM: 63.8
1794 Male, age 80, right hemisphere 67.4
1841 Female, age 85, right hemisphere 66.1
1847 Female, age 91, left hemisphere 64.5
2521 Female, age 94, right hemisphere 63.2
2848 Male, age 76, right hemisphere 57.9
Subiculum
nTPM: 52.8
1977 Female, age 85, both hemispheres 62.8
1901 Male, age 80, both hemispheres 58.8
2042 Male, age 76, both hemispheres 51.5
2619 Male, age 74, both hemispheres 49.7
2438 Female, age 94, left hemisphere 49.1
2729 Female, age 91, right hemisphere 45.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.3
Samples: 197

Max nTPM: 93.6
Min nTPM: 32.6
Std nTPM: 11.1
Median nTPM: 56.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 93.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 91.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 90.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 85.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 83.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 82.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 82.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 81.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 79.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 78.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 77.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 659.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 659.3
FF:10169-103B7 60 years, female 947.9
FF:10153-102I9 76 years, female 370.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 114.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 114.1
Samples: 4

Max nTPM: 133.3
Min nTPM: 95.9
Sample A Female 133.3
Sample B Female 119.2
Sample C Male 108.1
Sample D Male 95.9
Entorhinal cortex
nTPM: 93.4
Samples: 4

Max nTPM: 101.4
Min nTPM: 84.5
Sample A Female 93.3
Sample B Female 101.4
Sample C Male 94.2
Sample D Male 84.5
Subiculum
nTPM: 98.2
Samples: 4

Max nTPM: 114.6
Min nTPM: 91.8
Sample A Female 114.6
Sample B Female 91.8
Sample C Male 92.9
Sample D Male 93.6
Ventral hippocampus
nTPM: 97.7
Samples: 4

Max nTPM: 114.0
Min nTPM: 86.4
Sample A Female 114.0
Sample B Female 88.0
Sample C Male 86.4
Sample D Male 102.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 125.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.6
Samples: 4

Max nTPM: 134.1
Min nTPM: 116.6
Sample A Male 116.6
Sample B Male 127.4
Sample C Female 124.1
Sample D Female 134.1
Hippocampal formation
nTPM: 115.1
Samples: 4

Max nTPM: 126.6
Min nTPM: 107.4
Sample A Male 126.6
Sample B Male 113.8
Sample C Female 112.6
Sample D Female 107.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.6
73817983 Antisense, RP_051214_01_A08, Mouse strain C57BL/6J (56 days, male) 21.2
634466 Antisense, RP_040914_01_B05, Mouse strain C57BL/6J (56 days, male) 20.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.