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GABRA1
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		81.814
RNA expressioni
Consensus:6.7 nTPM
HPA:6.7 nTPM
GTEx:8.4 nTPM
FANTOM5:59.6 Scaled Tags Per Million
Pig:23.5 nTPM
Mouse:173.4 nTPM
Allen mouse:9.8 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA055746
Amygdala mean intensity 81.814
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 70.092
Basal medial amygdaloid nucleus 66.138
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 56.159
Cortical amygdala 81.814
Central amygdala 43.689
Medial amygdaloid nucleus 72.981

AMYGDALA - HPA Brain RNA-seq
Max nTPM 6.7
Sample id Sample description nTPM
Amygdala
nTPM: 0.0
1987 Female, age 91, left hemisphere 0.0
2514 Male, age 75, right hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 0.0
1955 Male, age 76, both hemispheres 0.0
2110 Male, age 80, left hemisphere 0.0
2243 Female, age 91, right hemisphere 0.0
2609 Male, age 75, right hemisphere 0.0
2685 Female, age 94, left hemisphere 0.0
2827 Female, age 67, right hemisphere 0.0
Central amygdala
nTPM: 0.0
1905 Male, age 76, both hemispheres 0.0
2239 Male, age 80, left hemisphere 0.0
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 0.0
2240 Male, age 76, both hemispheres 0.0
2242 Female, age 91, right hemisphere 0.0
2428 Male, age 75, right hemisphere 0.0
2429 Female, age 94, left hemisphere 0.0
2535 Female, age 67, right hemisphere 0.0
2829 Male, age 80, left hemisphere 0.0
Lateral amygdala
nTPM: 0.0
1883 Male, age 76, both hemispheres 0.0
2255 Female, age 91, right hemisphere 0.0
2256 Male, age 80, left hemisphere 0.0
2516 Male, age 75, right hemisphere 0.0
2534 Female, age 94, left hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 6.7
1974 Female, age 91, both hemispheres 20.0
2486 Female, age 94, both hemispheres 0.1
2201 Male, age 74, unknown 0.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 8.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 8.4
Samples: 152

Max nTPM: 29.9
Min nTPM: 0.0
Std nTPM: 5.7
Median nTPM: 7.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 29.9
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 26.3
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 25.8
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 25.7
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 23.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 20.1
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 19.1
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 18.4
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 18.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 17.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 17.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 59.6
FF:10151-102I7 76 years, female 59.6

AMYGDALA - Pig RNA-seqi
Average nTPM 23.5
Pig sample Sample description nTPM
Amygdala
nTPM: 23.5
Samples: 4

Max nTPM: 27.5
Min nTPM: 17.9
Sample A Female 25.2
Sample B Female 27.5
Sample C Male 17.9
Sample D Male 23.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 173.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 173.4
Samples: 4

Max nTPM: 184.5
Min nTPM: 163.9
Sample A Male 184.5
Sample B Male 164.3
Sample C Female 180.8
Sample D Female 163.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 9.8
72340131 Antisense, RP_051101_02_A09, Mouse strain C57BL/6J (56 days, male) 12.3
69856453 Antisense, RP_050331_02_B11, Mouse strain C57BL/6J (56 days, male) 7.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.