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NDUFS1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:10.7 nTPM
HPA:10.7 nTPM
GTEx:22.9 nTPM
FANTOM5:98.2 Scaled Tags Per Million
Pig:39.8 nTPM
Mouse:129.8 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB070844
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.7
Sample id Sample description nTPM
Hippocampus
nTPM: 6.8
1898 Male, age 80, left hemisphere 11.5
2529 Female, age 94, left hemisphere 6.6
2621 Female, age 67, right hemisphere 6.3
2148 Female, age 91, left hemisphere 6.0
1911 Female, age 85, right hemisphere 5.3
1855 Male, age 76, left hemisphere 4.8
Dentate gyrus
nTPM: 6.3
1927 Female, age 91, both hemispheres 10.1
2010 Male, age 76, both hemispheres 7.6
2528 Male, age 74, both hemispheres 6.9
2246 Female, age 85, both hemispheres 5.1
2530 Female, age 94, left hemisphere 4.5
2531 Female, age 67, both hemispheres 3.8
Entorhinal gyrus
nTPM: 7.0
2764 Male, age 80, right hemisphere 9.3
1938 Female, age 85, left hemisphere 7.7
2117 Female, age 91, right hemisphere 6.7
2613 Female, age 94, left hemisphere 6.6
1787 Male, age 76, left hemisphere 6.5
2686 Male, age 75, right hemisphere 5.3
Hippocampus, CA1
nTPM: 9.0
2749 Male, age 80, left hemisphere 15.8
2527 Male, age 74, both hemispheres 9.7
1873 Female, age 85, both hemispheres 8.4
2082 Female, age 91, right hemisphere 5.8
2045 Male, age 76, both hemispheres 5.4
Hippocampus, CA2
nTPM: 8.0
1963 Male, age 80, left hemisphere 11.6
1892 Male, age 76, both hemispheres 10.3
2249 Male, age 74, both hemispheres 10.1
2113 Female, age 91, right hemisphere 6.0
1940 Female, age 85, left hemisphere 5.6
2437 Female, age 94, left hemisphere 4.3
Hippocampus, CA3
nTPM: 8.5
2436 Male, age 74, both hemispheres 17.5
2137 Male, age 80, left hemisphere 11.1
1867 Male, age 76, both hemispheres 7.6
1891 Female, age 85, both hemispheres 7.1
2620 Female, age 94, left hemisphere 4.6
2861 Female, age 67, both hemispheres 3.3
Parahippocampal cortex
nTPM: 7.8
1850 Male, age 80, both hemispheres 12.4
1990 Female, age 91, right hemisphere 9.3
2250 Female, age 67, right hemisphere 8.3
2692 Male, age 74, both hemispheres 7.9
2693 Female, age 94, both hemispheres 7.8
1933 Female, age 85, both hemispheres 7.7
2245 Female, age 91, both hemispheres 7.1
2532 Female, age 72, left hemisphere 7.1
2018 Male, age 76, both hemispheres 6.1
2622 Female, age 67, right hemisphere 4.5
Perirhinal gyrus
nTPM: 10.7
1847 Female, age 91, left hemisphere 14.2
1794 Male, age 80, right hemisphere 12.4
1841 Female, age 85, right hemisphere 11.5
2521 Female, age 94, right hemisphere 7.8
2848 Male, age 76, right hemisphere 7.4
Subiculum
nTPM: 6.4
1901 Male, age 80, both hemispheres 9.4
1977 Female, age 85, both hemispheres 9.2
2619 Male, age 74, both hemispheres 6.5
2729 Female, age 91, right hemisphere 6.2
2042 Male, age 76, both hemispheres 4.7
2438 Female, age 94, left hemisphere 2.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.9
Samples: 197

Max nTPM: 41.5
Min nTPM: 8.7
Std nTPM: 6.0
Median nTPM: 22.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 41.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 39.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 35.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 35.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 34.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 34.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 34.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 33.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 33.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 33.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 33.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.2
FF:10169-103B7 60 years, female 114.0
FF:10153-102I9 76 years, female 82.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 46.1
Min nTPM: 30.8
Sample A Female 46.1
Sample B Female 39.5
Sample C Male 40.3
Sample D Male 30.8
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 50.3
Min nTPM: 32.2
Sample A Female 39.8
Sample B Female 50.3
Sample C Male 37.0
Sample D Male 32.2
Subiculum
nTPM: 35.1
Samples: 4

Max nTPM: 44.4
Min nTPM: 31.2
Sample A Female 44.4
Sample B Female 32.3
Sample C Male 31.2
Sample D Male 32.3
Ventral hippocampus
nTPM: 35.4
Samples: 4

Max nTPM: 43.3
Min nTPM: 29.3
Sample A Female 43.3
Sample B Female 29.3
Sample C Male 35.8
Sample D Male 33.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 129.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.0
Samples: 4

Max nTPM: 123.8
Min nTPM: 117.9
Sample A Male 117.9
Sample B Male 123.8
Sample C Female 122.7
Sample D Female 119.7
Hippocampal formation
nTPM: 129.9
Samples: 4

Max nTPM: 142.1
Min nTPM: 120.0
Sample A Male 142.1
Sample B Male 125.2
Sample C Female 132.1
Sample D Female 120.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
100144161 Antisense, RP_110421_01_A11, Mouse strain C57BL/6J (56 days, male) 8.2
2421 Antisense, RP_040407_02_D12, Mouse strain C57BL/6J (56 days, male) 5.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.