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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.9 nTPM
HPA:15.9 nTPM
GTEx:10.3 nTPM
FANTOM5:42.9 Scaled Tags Per Million
Pig:38.4 nTPM
Mouse:41.7 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068664
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.7
1898 Male, age 80, left hemisphere 15.8
1911 Female, age 85, right hemisphere 15.0
2148 Female, age 91, left hemisphere 13.1
2529 Female, age 94, left hemisphere 13.0
1855 Male, age 76, left hemisphere 12.9
2621 Female, age 67, right hemisphere 12.3
Dentate gyrus
nTPM: 14.6
2010 Male, age 76, both hemispheres 16.8
1927 Female, age 91, both hemispheres 16.2
2246 Female, age 85, both hemispheres 15.2
2531 Female, age 67, both hemispheres 14.2
2530 Female, age 94, left hemisphere 12.7
2528 Male, age 74, both hemispheres 12.3
Entorhinal gyrus
nTPM: 13.8
1938 Female, age 85, left hemisphere 15.5
1787 Male, age 76, left hemisphere 14.5
2764 Male, age 80, right hemisphere 14.1
2117 Female, age 91, right hemisphere 13.3
2613 Female, age 94, left hemisphere 13.1
2686 Male, age 75, right hemisphere 12.6
Hippocampus, CA1
nTPM: 15.9
2749 Male, age 80, left hemisphere 22.3
2045 Male, age 76, both hemispheres 16.3
1873 Female, age 85, both hemispheres 15.8
2082 Female, age 91, right hemisphere 13.2
2527 Male, age 74, both hemispheres 11.8
Hippocampus, CA2
nTPM: 13.2
1963 Male, age 80, left hemisphere 15.6
1892 Male, age 76, both hemispheres 13.9
1940 Female, age 85, left hemisphere 13.3
2113 Female, age 91, right hemisphere 13.3
2249 Male, age 74, both hemispheres 11.8
2437 Female, age 94, left hemisphere 11.2
Hippocampus, CA3
nTPM: 15.4
2137 Male, age 80, left hemisphere 22.4
1891 Female, age 85, both hemispheres 15.5
1867 Male, age 76, both hemispheres 14.9
2620 Female, age 94, left hemisphere 13.5
2861 Female, age 67, both hemispheres 13.1
2436 Male, age 74, both hemispheres 12.9
Parahippocampal cortex
nTPM: 13.4
1850 Male, age 80, both hemispheres 16.0
1933 Female, age 85, both hemispheres 15.5
2018 Male, age 76, both hemispheres 14.6
2245 Female, age 91, both hemispheres 13.9
1990 Female, age 91, right hemisphere 13.7
2532 Female, age 72, left hemisphere 13.0
2622 Female, age 67, right hemisphere 12.7
2250 Female, age 67, right hemisphere 12.6
2693 Female, age 94, both hemispheres 11.3
2692 Male, age 74, both hemispheres 11.0
Perirhinal gyrus
nTPM: 15.4
1847 Female, age 91, left hemisphere 17.0
1794 Male, age 80, right hemisphere 16.7
1841 Female, age 85, right hemisphere 16.2
2848 Male, age 76, right hemisphere 14.2
2521 Female, age 94, right hemisphere 12.6
Subiculum
nTPM: 13.6
1977 Female, age 85, both hemispheres 15.7
1901 Male, age 80, both hemispheres 15.5
2042 Male, age 76, both hemispheres 14.2
2729 Female, age 91, right hemisphere 13.4
2438 Female, age 94, left hemisphere 12.4
2619 Male, age 74, both hemispheres 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.3
Samples: 197

Max nTPM: 16.8
Min nTPM: 6.6
Std nTPM: 1.9
Median nTPM: 9.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 16.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 16.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 16.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 16.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 15.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 15.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 14.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 14.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 14.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 14.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 13.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.9
FF:10153-102I9 76 years, female 45.1
FF:10169-103B7 60 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 40.4
Min nTPM: 34.8
Sample A Female 40.4
Sample B Female 40.1
Sample C Male 38.3
Sample D Male 34.8
Entorhinal cortex
nTPM: 36.1
Samples: 4

Max nTPM: 42.2
Min nTPM: 26.4
Sample A Female 37.5
Sample B Female 42.2
Sample C Male 38.4
Sample D Male 26.4
Subiculum
nTPM: 36.8
Samples: 4

Max nTPM: 43.4
Min nTPM: 31.0
Sample A Female 43.4
Sample B Female 40.4
Sample C Male 31.0
Sample D Male 32.4
Ventral hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 39.3
Min nTPM: 29.7
Sample A Female 33.3
Sample B Female 39.3
Sample C Male 37.4
Sample D Male 29.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.7
Samples: 4

Max nTPM: 43.1
Min nTPM: 34.0
Sample A Male 43.1
Sample B Male 42.3
Sample C Female 34.0
Sample D Female 35.4
Hippocampal formation
nTPM: 41.7
Samples: 4

Max nTPM: 44.7
Min nTPM: 35.5
Sample A Male 42.9
Sample B Male 43.7
Sample C Female 44.7
Sample D Female 35.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
73929582 Antisense, RP_051214_03_G04, Mouse strain C57BL/6J (56 days, male) 1.7
69873313 Antisense, RP_050512_01_A04, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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