ABOUTMENU
HELP
NEWS
CYP46A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:52.7 nTPM
HPA:52.7 nTPM
GTEx:64.5 nTPM
FANTOM5:41.8 Scaled Tags Per Million
Pig:114.9 nTPM
Mouse:133.1 nTPM
Allen mouse:21.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.7
Sample id Sample description nTPM
Hippocampus
nTPM: 42.9
1898 Male, age 80, left hemisphere 48.1
2621 Female, age 67, right hemisphere 44.7
2529 Female, age 94, left hemisphere 44.3
1911 Female, age 85, right hemisphere 42.3
2148 Female, age 91, left hemisphere 40.7
1855 Male, age 76, left hemisphere 37.4
Dentate gyrus
nTPM: 40.7
2531 Female, age 67, both hemispheres 49.0
2246 Female, age 85, both hemispheres 43.9
2528 Male, age 74, both hemispheres 40.6
1927 Female, age 91, both hemispheres 40.5
2530 Female, age 94, left hemisphere 37.6
2010 Male, age 76, both hemispheres 32.7
Entorhinal gyrus
nTPM: 47.4
2613 Female, age 94, left hemisphere 55.3
1787 Male, age 76, left hemisphere 53.3
2764 Male, age 80, right hemisphere 49.2
1938 Female, age 85, left hemisphere 46.0
2117 Female, age 91, right hemisphere 41.2
2686 Male, age 75, right hemisphere 39.1
Hippocampus, CA1
nTPM: 48.7
2749 Male, age 80, left hemisphere 72.6
2527 Male, age 74, both hemispheres 53.7
2082 Female, age 91, right hemisphere 45.1
1873 Female, age 85, both hemispheres 37.6
2045 Male, age 76, both hemispheres 34.6
Hippocampus, CA2
nTPM: 42.8
1892 Male, age 76, both hemispheres 48.9
2249 Male, age 74, both hemispheres 44.7
2113 Female, age 91, right hemisphere 43.2
2437 Female, age 94, left hemisphere 42.7
1940 Female, age 85, left hemisphere 41.1
1963 Male, age 80, left hemisphere 35.9
Hippocampus, CA3
nTPM: 52.5
2137 Male, age 80, left hemisphere 80.5
2861 Female, age 67, both hemispheres 55.3
2620 Female, age 94, left hemisphere 51.7
1867 Male, age 76, both hemispheres 48.1
2436 Male, age 74, both hemispheres 41.8
1891 Female, age 85, both hemispheres 37.4
Parahippocampal cortex
nTPM: 46.9
2245 Female, age 91, both hemispheres 60.4
2622 Female, age 67, right hemisphere 51.2
2693 Female, age 94, both hemispheres 49.5
2250 Female, age 67, right hemisphere 49.3
2692 Male, age 74, both hemispheres 45.6
1933 Female, age 85, both hemispheres 44.4
2532 Female, age 72, left hemisphere 43.0
2018 Male, age 76, both hemispheres 42.9
1990 Female, age 91, right hemisphere 42.4
1850 Male, age 80, both hemispheres 40.9
Perirhinal gyrus
nTPM: 52.7
1794 Male, age 80, right hemisphere 60.6
1847 Female, age 91, left hemisphere 55.7
2521 Female, age 94, right hemisphere 51.3
1841 Female, age 85, right hemisphere 48.9
2848 Male, age 76, right hemisphere 47.1
Subiculum
nTPM: 45.2
1901 Male, age 80, both hemispheres 53.5
2619 Male, age 74, both hemispheres 49.0
1977 Female, age 85, both hemispheres 47.8
2438 Female, age 94, left hemisphere 46.0
2729 Female, age 91, right hemisphere 40.0
2042 Male, age 76, both hemispheres 34.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.5
Samples: 197

Max nTPM: 203.7
Min nTPM: 4.7
Std nTPM: 39.1
Median nTPM: 57.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 203.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 203.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 198.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 188.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 187.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 169.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 169.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 166.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 148.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 148.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 146.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.8
FF:10169-103B7 60 years, female 52.3
FF:10153-102I9 76 years, female 31.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 114.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 108.7
Samples: 4

Max nTPM: 130.9
Min nTPM: 85.1
Sample A Female 130.9
Sample B Female 124.3
Sample C Male 85.1
Sample D Male 94.4
Entorhinal cortex
nTPM: 114.9
Samples: 4

Max nTPM: 127.9
Min nTPM: 96.6
Sample A Female 126.9
Sample B Female 108.0
Sample C Male 127.9
Sample D Male 96.6
Subiculum
nTPM: 104.6
Samples: 4

Max nTPM: 135.9
Min nTPM: 85.9
Sample A Female 135.9
Sample B Female 93.2
Sample C Male 103.2
Sample D Male 85.9
Ventral hippocampus
nTPM: 99.3
Samples: 4

Max nTPM: 153.6
Min nTPM: 67.8
Sample A Female 67.8
Sample B Female 71.9
Sample C Male 103.7
Sample D Male 153.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 133.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 133.1
Samples: 4

Max nTPM: 151.3
Min nTPM: 119.6
Sample A Male 119.8
Sample B Male 141.7
Sample C Female 119.6
Sample D Female 151.3
Hippocampal formation
nTPM: 87.7
Samples: 4

Max nTPM: 98.4
Min nTPM: 73.7
Sample A Male 98.4
Sample B Male 83.7
Sample C Female 73.7
Sample D Female 94.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.4
532667 Antisense, RP_040825_01_C02, Mouse strain C57BL/6J (56 days, male) 24.4
70613977 Antisense, RP_050725_01_C08, Mouse strain C57BL/6J (56 days, male) 18.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.