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PSMA4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:64.7 nTPM
HPA:64.7 nTPM
GTEx:68.1 nTPM
FANTOM5:65.4 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:176.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055466Antibody HPA060613Antibody CAB004973
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.7
Sample id Sample description nTPM
Hippocampus
nTPM: 63.1
1898 Male, age 80, left hemisphere 69.1
1855 Male, age 76, left hemisphere 64.2
2621 Female, age 67, right hemisphere 63.0
1911 Female, age 85, right hemisphere 61.6
2529 Female, age 94, left hemisphere 60.4
2148 Female, age 91, left hemisphere 60.1
Dentate gyrus
nTPM: 62.9
2010 Male, age 76, both hemispheres 66.0
1927 Female, age 91, both hemispheres 64.6
2530 Female, age 94, left hemisphere 64.0
2246 Female, age 85, both hemispheres 62.2
2528 Male, age 74, both hemispheres 61.2
2531 Female, age 67, both hemispheres 59.2
Entorhinal gyrus
nTPM: 61.2
1938 Female, age 85, left hemisphere 64.3
2764 Male, age 80, right hemisphere 63.4
1787 Male, age 76, left hemisphere 61.3
2613 Female, age 94, left hemisphere 60.9
2686 Male, age 75, right hemisphere 58.7
2117 Female, age 91, right hemisphere 58.6
Hippocampus, CA1
nTPM: 64.1
2749 Male, age 80, left hemisphere 70.3
1873 Female, age 85, both hemispheres 67.9
2045 Male, age 76, both hemispheres 62.1
2527 Male, age 74, both hemispheres 61.1
2082 Female, age 91, right hemisphere 59.0
Hippocampus, CA2
nTPM: 64.6
1892 Male, age 76, both hemispheres 69.0
2249 Male, age 74, both hemispheres 68.1
1963 Male, age 80, left hemisphere 65.2
1940 Female, age 85, left hemisphere 63.6
2437 Female, age 94, left hemisphere 61.9
2113 Female, age 91, right hemisphere 60.0
Hippocampus, CA3
nTPM: 62.8
1867 Male, age 76, both hemispheres 66.0
2436 Male, age 74, both hemispheres 65.1
1891 Female, age 85, both hemispheres 63.6
2137 Male, age 80, left hemisphere 63.4
2620 Female, age 94, left hemisphere 59.5
2861 Female, age 67, both hemispheres 59.4
Parahippocampal cortex
nTPM: 61.9
1850 Male, age 80, both hemispheres 66.6
2018 Male, age 76, both hemispheres 63.7
2250 Female, age 67, right hemisphere 63.7
1990 Female, age 91, right hemisphere 63.0
1933 Female, age 85, both hemispheres 62.6
2245 Female, age 91, both hemispheres 61.2
2532 Female, age 72, left hemisphere 60.6
2693 Female, age 94, both hemispheres 60.4
2692 Male, age 74, both hemispheres 59.9
2622 Female, age 67, right hemisphere 57.6
Perirhinal gyrus
nTPM: 64.7
1841 Female, age 85, right hemisphere 67.2
1847 Female, age 91, left hemisphere 66.6
1794 Male, age 80, right hemisphere 63.9
2521 Female, age 94, right hemisphere 63.0
2848 Male, age 76, right hemisphere 62.7
Subiculum
nTPM: 61.5
1901 Male, age 80, both hemispheres 65.7
1977 Female, age 85, both hemispheres 63.8
2042 Male, age 76, both hemispheres 61.7
2438 Female, age 94, left hemisphere 59.3
2729 Female, age 91, right hemisphere 59.3
2619 Male, age 74, both hemispheres 58.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.1
Samples: 197

Max nTPM: 136.5
Min nTPM: 34.9
Std nTPM: 16.3
Median nTPM: 66.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 136.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 130.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 119.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 108.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 106.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 104.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 103.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 101.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 100.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 98.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 95.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.4
FF:10169-103B7 60 years, female 96.2
FF:10153-102I9 76 years, female 34.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 17.3
Min nTPM: 14.8
Sample A Female 17.3
Sample B Female 15.5
Sample C Male 15.7
Sample D Male 14.8
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 16.1
Min nTPM: 13.2
Sample A Female 15.0
Sample B Female 16.1
Sample C Male 13.2
Sample D Male 14.0
Subiculum
nTPM: 14.5
Samples: 4

Max nTPM: 15.5
Min nTPM: 13.7
Sample A Female 15.5
Sample B Female 14.3
Sample C Male 13.7
Sample D Male 14.6
Ventral hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.9
Sample A Female 16.0
Sample B Female 12.9
Sample C Male 14.3
Sample D Male 15.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 176.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 163.0
Samples: 4

Max nTPM: 175.8
Min nTPM: 153.7
Sample A Male 156.4
Sample B Male 165.9
Sample C Female 175.8
Sample D Female 153.7
Hippocampal formation
nTPM: 176.6
Samples: 4

Max nTPM: 205.9
Min nTPM: 163.6
Sample A Male 205.9
Sample B Male 169.4
Sample C Female 167.5
Sample D Female 163.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.