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CDK17
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:23.0 nTPM
HPA:23.0 nTPM
GTEx:16.6 nTPM
FANTOM5:114.0 Scaled Tags Per Million
Pig:21.0 nTPM
Mouse:41.1 nTPM
Allen mouse:14.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 21.0
2019 Male, age 18, unknown 25.5
1830 Male, age 51, unknown 25.0
1870 Female, age 42, unknown 24.8
1833 Male, age 53, unknown 24.5
2411 Female, age 72, unknown 22.4
2586 Male, age 75, left hemisphere 18.9
2666 Male, age 74, left hemisphere 18.9
2219 Male, age 76, both hemispheres 17.2
2828 Female, age 72, unknown 16.6
1827 Male, age 72, unknown 16.2
Dorsal raphe nucleus
nTPM: 14.8
2750 Male, age 76, both hemispheres 18.8
2016 Female, age 72, unknown 17.1
2298 Female, age 72, unknown 14.5
1828 Male, age 53, unknown 13.8
2047 Male, age 72, unknown 9.9
Inferior colliculus
nTPM: 17.5
2849 Male, age 72, unknown 19.5
1848 Female, age 42, unknown 18.0
1890 Male, age 53, unknown 18.0
2097 Female, age 72, unknown 14.5
Median raphe nucleus
nTPM: 17.4
2220 Male, age 76, midline 17.4
Pedunculopontine tegmental nucleus
nTPM: 16.3
2334 Male, age 80, both hemispheres 17.0
2338 Male, age 61, both hemispheres 16.8
1921 Female, age 85, both hemispheres 15.2
Periaquaductal grey, anterior
nTPM: 16.8
2502 Female, age 75, unknown 20.7
1947 Male, age 18, unknown 17.0
1795 Male, age 51, unknown 12.8
Periaquaductal grey, dorsal
nTPM: 17.2
2850 Male, age 76, both hemispheres 20.9
2464 Female, age 72, unknown 17.1
1831 Male, age 72, unknown 16.1
1840 Male, age 53, unknown 14.8
Periaquaductal grey, lateral
nTPM: 18.6
2272 Male, age 74, both hemispheres 21.1
2140 Male, age 76, both hemispheres 19.6
2053 Male, age 18, unknown 15.2
Pretectal area
nTPM: 18.7
1815 Male, age 53, unknown 22.3
2273 Male, age 74, both hemispheres 20.5
1817 Female, age 42, unknown 19.3
2316 Male, age 76, right hemisphere 19.0
2667 Female, age 75, unknown 18.7
2224 Female, age 72, unknown 18.5
2007 Male, age 72, unknown 18.3
1816 Male, age 51, unknown 18.0
2407 Male, age 75, both hemispheres 17.5
2825 Male, age 18, unknown 17.4
1944 Female, age 72, unknown 16.1
Red nucleus
nTPM: 23.0
2503 Female, age 72, unknown 27.5
1865 Male, age 51, unknown 27.3
1904 Male, age 53, unknown 25.7
2785 Male, age 18, unknown 24.6
2227 Male, age 72, unknown 24.0
1954 Female, age 42, unknown 23.3
2769 Male, age 72, unknown 22.1
1821 Female, age 72, unknown 21.4
2584 Male, age 75, left hemisphere 20.2
2725 Female, age 75, unknown 20.2
2823 Male, age 76, right hemisphere 20.2
2588 Male, age 74, left hemisphere 19.8
Substantia nigra
nTPM: 19.3
2241 Male, age 72, unknown 24.1
2409 Female, age 72, unknown 23.7
2583 Male, age 75, right hemisphere 23.6
1851 Male, age 51, unknown 20.4
2699 Male, age 18, unknown 19.5
2590 Female, age 75, unknown 18.5
1889 Female, age 72, unknown 18.4
1916 Female, age 42, unknown 17.8
1941 Male, age 53, unknown 15.4
2665 Male, age 74, both hemispheres 11.9
Superior colliculus
nTPM: 21.0
1913 Female, age 42, unknown 30.4
1995 Male, age 72, unknown 26.8
2587 Male, age 74, left hemisphere 21.0
1895 Male, age 76, right hemisphere 20.4
1839 Male, age 51, unknown 20.0
2087 Female, age 72, unknown 19.7
2668 Female, age 75, unknown 19.7
2261 Male, age 18, unknown 19.2
1796 Male, age 53, unknown 18.6
2664 Male, age 75, both hemispheres 14.0
Ventral tegmental area
nTPM: 20.0
2223 Female, age 72, unknown 26.1
2410 Female, age 72, unknown 22.5
2021 Male, age 53, unknown 19.6
1915 Female, age 42, unknown 18.4
1942 Male, age 51, unknown 17.1
2218 Male, age 76, both hemispheres 16.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 16.6
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 16.6
Samples: 139

Max nTPM: 33.3
Min nTPM: 10.7
Std nTPM: 4.2
Median nTPM: 15.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 33.3
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 29.7
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 28.8
GTEX-QDT8-0011-R2A-SM-32PKQ 30-39 years, female 28.2
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 26.7
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 26.2
GTEX-139TS-0011-R2b-SM-5J1MX 60-69 years, male 26.0
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 26.0
GTEX-11ZTS-0011-R2b-SM-5BC75 60-69 years, female 25.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 24.8
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 24.0
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 114.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 114.0
FF:10158-103A5 76 years, female 114.0

MIDBRAIN - Pig RNA-seqi
Average nTPM 21.0
Pig sample Sample description nTPM
Midbrain
nTPM: 19.8
Samples: 4

Max nTPM: 20.9
Min nTPM: 18.1
Sample A Female 20.2
Sample B Female 19.9
Sample C Male 20.9
Sample D Male 18.1
Periaqueductal gray
nTPM: 15.5
Samples: 3

Max nTPM: 16.4
Min nTPM: 14.0
Sample B Female 16.0
Sample C Male 14.0
Sample D Male 16.4
Substantia nigra
nTPM: 21.0
Samples: 4

Max nTPM: 22.9
Min nTPM: 17.6
Sample A Female 22.7
Sample B Female 17.6
Sample C Male 22.9
Sample D Male 20.8
Superior colliculi
nTPM: 15.7
Samples: 4

Max nTPM: 17.6
Min nTPM: 11.4
Sample A Female 16.2
Sample B Female 11.4
Sample C Male 17.6
Sample D Male 17.6

MIDBRAIN - Mouse RNA-seqi
Average nTPM 41.1
Mouse sample Sample description nTPM
Midbrain
nTPM: 41.1
Samples: 4

Max nTPM: 42.5
Min nTPM: 39.6
Sample A Male 39.6
Sample B Male 40.5
Sample C Female 42.5
Sample D Female 41.9

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 14.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 14.0
69262342 Antisense, RP_050303_02_B12, Mouse strain C57BL/6J (56 days, male) 14.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.