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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.3 nTPM
HPA:15.3 nTPM
GTEx:13.9 nTPM
FANTOM5:22.3 Scaled Tags Per Million
Pig:33.8 nTPM
Mouse:30.4 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046298Antibody CAB005256
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 14.5
1898 Male, age 80, left hemisphere 15.7
1911 Female, age 85, right hemisphere 15.0
1855 Male, age 76, left hemisphere 14.7
2621 Female, age 67, right hemisphere 14.2
2529 Female, age 94, left hemisphere 13.7
2148 Female, age 91, left hemisphere 13.4
Dentate gyrus
nTPM: 14.5
2010 Male, age 76, both hemispheres 15.6
1927 Female, age 91, both hemispheres 14.9
2531 Female, age 67, both hemispheres 14.4
2246 Female, age 85, both hemispheres 14.3
2528 Male, age 74, both hemispheres 14.3
2530 Female, age 94, left hemisphere 13.4
Entorhinal gyrus
nTPM: 14.2
1938 Female, age 85, left hemisphere 16.9
2764 Male, age 80, right hemisphere 15.5
2613 Female, age 94, left hemisphere 14.9
1787 Male, age 76, left hemisphere 14.3
2117 Female, age 91, right hemisphere 13.4
2686 Male, age 75, right hemisphere 9.9
Hippocampus, CA1
nTPM: 15.3
2749 Male, age 80, left hemisphere 18.3
1873 Female, age 85, both hemispheres 15.4
2045 Male, age 76, both hemispheres 15.3
2527 Male, age 74, both hemispheres 14.5
2082 Female, age 91, right hemisphere 13.0
Hippocampus, CA2
nTPM: 13.6
2249 Male, age 74, both hemispheres 16.1
1892 Male, age 76, both hemispheres 14.4
1940 Female, age 85, left hemisphere 13.4
1963 Male, age 80, left hemisphere 13.4
2113 Female, age 91, right hemisphere 12.3
2437 Female, age 94, left hemisphere 11.9
Hippocampus, CA3
nTPM: 15.3
2620 Female, age 94, left hemisphere 17.9
2436 Male, age 74, both hemispheres 16.9
2137 Male, age 80, left hemisphere 16.4
1891 Female, age 85, both hemispheres 14.0
1867 Male, age 76, both hemispheres 13.9
2861 Female, age 67, both hemispheres 12.5
Parahippocampal cortex
nTPM: 13.6
1933 Female, age 85, both hemispheres 15.0
1850 Male, age 80, both hemispheres 14.7
1990 Female, age 91, right hemisphere 14.5
2532 Female, age 72, left hemisphere 14.3
2250 Female, age 67, right hemisphere 14.1
2245 Female, age 91, both hemispheres 13.6
2018 Male, age 76, both hemispheres 13.1
2693 Female, age 94, both hemispheres 12.7
2692 Male, age 74, both hemispheres 12.4
2622 Female, age 67, right hemisphere 11.9
Perirhinal gyrus
nTPM: 15.0
1847 Female, age 91, left hemisphere 17.8
1841 Female, age 85, right hemisphere 16.0
1794 Male, age 80, right hemisphere 14.8
2521 Female, age 94, right hemisphere 13.7
2848 Male, age 76, right hemisphere 12.6
Subiculum
nTPM: 14.2
1977 Female, age 85, both hemispheres 15.9
1901 Male, age 80, both hemispheres 15.4
2042 Male, age 76, both hemispheres 13.8
2438 Female, age 94, left hemisphere 13.5
2619 Male, age 74, both hemispheres 13.3
2729 Female, age 91, right hemisphere 13.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 23.1
Min nTPM: 10.3
Std nTPM: 2.0
Median nTPM: 13.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 23.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 20.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 20.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 18.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 18.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 18.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 18.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 17.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 17.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 17.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 17.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.3
FF:10153-102I9 76 years, female 33.1
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 37.0
Min nTPM: 27.1
Sample A Female 37.0
Sample B Female 32.7
Sample C Male 28.4
Sample D Male 27.1
Entorhinal cortex
nTPM: 33.8
Samples: 4

Max nTPM: 36.9
Min nTPM: 31.2
Sample A Female 35.0
Sample B Female 31.9
Sample C Male 36.9
Sample D Male 31.2
Subiculum
nTPM: 32.6
Samples: 4

Max nTPM: 40.8
Min nTPM: 26.6
Sample A Female 40.8
Sample B Female 30.6
Sample C Male 32.3
Sample D Male 26.6
Ventral hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 36.3
Min nTPM: 26.0
Sample A Female 26.0
Sample B Female 26.6
Sample C Male 36.2
Sample D Male 36.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 28.9
Min nTPM: 25.8
Sample A Male 26.5
Sample B Male 25.8
Sample C Female 28.1
Sample D Female 28.9
Hippocampal formation
nTPM: 30.4
Samples: 4

Max nTPM: 32.5
Min nTPM: 27.9
Sample A Male 30.3
Sample B Male 31.0
Sample C Female 32.5
Sample D Female 27.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
71496553 Antisense, RP_050913_04_G07, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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