ABOUTMENU
HELP
NEWS
ELAVL1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.6 nTPM
HPA:15.6 nTPM
GTEx:14.1 nTPM
FANTOM5:36.2 Scaled Tags Per Million
Pig:30.1 nTPM
Mouse:27.6 nTPM
Allen mouse:0.7 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 15.6
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 12.4
2019 Male, age 18, unknown 14.0
1870 Female, age 42, unknown 13.5
1827 Male, age 72, unknown 12.9
2586 Male, age 75, left hemisphere 12.6
2411 Female, age 72, unknown 12.5
2828 Female, age 72, unknown 12.5
1833 Male, age 53, unknown 12.3
1830 Male, age 51, unknown 12.1
2219 Male, age 76, both hemispheres 11.6
2666 Male, age 74, left hemisphere 10.4
Dorsal raphe nucleus
nTPM: 13.2
2298 Female, age 72, unknown 14.4
2750 Male, age 76, both hemispheres 14.2
2016 Female, age 72, unknown 12.9
2047 Male, age 72, unknown 12.8
1828 Male, age 53, unknown 11.9
Inferior colliculus
nTPM: 13.6
2097 Female, age 72, unknown 14.4
1890 Male, age 53, unknown 13.8
2849 Male, age 72, unknown 13.3
1848 Female, age 42, unknown 13.0
Median raphe nucleus
nTPM: 11.8
2220 Male, age 76, midline 11.8
Pedunculopontine tegmental nucleus
nTPM: 11.8
2334 Male, age 80, both hemispheres 12.2
1921 Female, age 85, both hemispheres 12.0
2338 Male, age 61, both hemispheres 11.2
Periaquaductal grey, anterior
nTPM: 13.1
1947 Male, age 18, unknown 13.5
1795 Male, age 51, unknown 12.9
2502 Female, age 75, unknown 12.8
Periaquaductal grey, dorsal
nTPM: 13.6
2850 Male, age 76, both hemispheres 14.9
1840 Male, age 53, unknown 14.8
1831 Male, age 72, unknown 12.8
2464 Female, age 72, unknown 11.8
Periaquaductal grey, lateral
nTPM: 15.6
2272 Male, age 74, both hemispheres 17.7
2140 Male, age 76, both hemispheres 15.8
2053 Male, age 18, unknown 13.2
Pretectal area
nTPM: 14.5
2273 Male, age 74, both hemispheres 16.9
1944 Female, age 72, unknown 16.6
1816 Male, age 51, unknown 15.3
2007 Male, age 72, unknown 14.9
1817 Female, age 42, unknown 14.6
1815 Male, age 53, unknown 14.5
2667 Female, age 75, unknown 14.3
2316 Male, age 76, right hemisphere 13.5
2407 Male, age 75, both hemispheres 13.4
2224 Female, age 72, unknown 13.2
2825 Male, age 18, unknown 12.2
Red nucleus
nTPM: 12.5
2785 Male, age 18, unknown 14.2
2769 Male, age 72, unknown 13.3
1904 Male, age 53, unknown 13.2
2227 Male, age 72, unknown 13.2
2823 Male, age 76, right hemisphere 12.6
1865 Male, age 51, unknown 12.5
2503 Female, age 72, unknown 12.4
1954 Female, age 42, unknown 12.1
1821 Female, age 72, unknown 12.0
2725 Female, age 75, unknown 11.9
2584 Male, age 75, left hemisphere 11.8
2588 Male, age 74, left hemisphere 11.0
Substantia nigra
nTPM: 12.2
1889 Female, age 72, unknown 14.4
2590 Female, age 75, unknown 14.1
1851 Male, age 51, unknown 12.6
1916 Female, age 42, unknown 12.4
2583 Male, age 75, right hemisphere 12.4
1941 Male, age 53, unknown 11.7
2409 Female, age 72, unknown 11.5
2699 Male, age 18, unknown 11.4
2665 Male, age 74, both hemispheres 11.2
2241 Male, age 72, unknown 9.9
Superior colliculus
nTPM: 13.3
2087 Female, age 72, unknown 14.8
1995 Male, age 72, unknown 14.7
2261 Male, age 18, unknown 14.7
1895 Male, age 76, right hemisphere 14.5
1796 Male, age 53, unknown 13.8
2587 Male, age 74, left hemisphere 13.1
1913 Female, age 42, unknown 12.9
1839 Male, age 51, unknown 12.5
2668 Female, age 75, unknown 12.2
2664 Male, age 75, both hemispheres 9.9
Ventral tegmental area
nTPM: 12.9
2410 Female, age 72, unknown 14.5
2218 Male, age 76, both hemispheres 13.0
1915 Female, age 42, unknown 12.7
1942 Male, age 51, unknown 12.7
2021 Male, age 53, unknown 12.2
2223 Female, age 72, unknown 12.0

MIDBRAIN - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 14.1
Samples: 139

Max nTPM: 22.3
Min nTPM: 9.9
Std nTPM: 2.4
Median nTPM: 13.6
GTEX-13NYS-0011-R2b-SM-5MR4G 60-69 years, male 22.3
GTEX-NPJ8-0011-R2a-SM-2TC6M 40-49 years, male 21.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 21.2
GTEX-NL4W-0011-R2a-SM-2I5GV 50-59 years, male 20.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO 40-49 years, male 19.8
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 19.6
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 19.0
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 18.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z 60-69 years, male 18.4
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 18.0
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 17.7
Show allShow less

MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 36.2
FF:10158-103A5 76 years, female 36.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 30.1
Pig sample Sample description nTPM
Midbrain
nTPM: 30.1
Samples: 4

Max nTPM: 38.5
Min nTPM: 26.2
Sample A Female 38.5
Sample B Female 26.2
Sample C Male 27.0
Sample D Male 28.6
Periaqueductal gray
nTPM: 27.0
Samples: 3

Max nTPM: 30.0
Min nTPM: 23.9
Sample B Female 27.2
Sample C Male 30.0
Sample D Male 23.9
Substantia nigra
nTPM: 27.0
Samples: 4

Max nTPM: 29.9
Min nTPM: 24.9
Sample A Female 29.9
Sample B Female 24.9
Sample C Male 25.8
Sample D Male 27.4
Superior colliculi
nTPM: 29.7
Samples: 4

Max nTPM: 33.6
Min nTPM: 24.4
Sample A Female 33.6
Sample B Female 32.7
Sample C Male 24.4
Sample D Male 27.9

MIDBRAIN - Mouse RNA-seqi
Average nTPM 27.6
Mouse sample Sample description nTPM
Midbrain
nTPM: 27.6
Samples: 4

Max nTPM: 29.3
Min nTPM: 25.9
Sample A Male 25.9
Sample B Male 27.5
Sample C Female 29.3
Sample D Female 27.5

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.7
71496553 Antisense, RP_050913_04_G07, Mouse strain C57BL/6J (56 days, male) 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.