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MSANTD3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.6 nTPM
HPA:9.6 nTPM
GTEx:14.2 nTPM
FANTOM5:24.9 Scaled Tags Per Million
Mouse:13.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.6
Sample id Sample description nTPM
Hippocampus
nTPM: 8.6
2621 Female, age 67, right hemisphere 10.8
1898 Male, age 80, left hemisphere 10.4
1855 Male, age 76, left hemisphere 8.7
2148 Female, age 91, left hemisphere 7.8
2529 Female, age 94, left hemisphere 7.6
1911 Female, age 85, right hemisphere 6.3
Dentate gyrus
nTPM: 8.8
2530 Female, age 94, left hemisphere 10.9
2010 Male, age 76, both hemispheres 10.2
2531 Female, age 67, both hemispheres 9.3
2246 Female, age 85, both hemispheres 8.3
1927 Female, age 91, both hemispheres 7.9
2528 Male, age 74, both hemispheres 6.5
Entorhinal gyrus
nTPM: 8.5
2764 Male, age 80, right hemisphere 10.2
2613 Female, age 94, left hemisphere 9.6
1787 Male, age 76, left hemisphere 8.8
2686 Male, age 75, right hemisphere 8.4
1938 Female, age 85, left hemisphere 8.0
2117 Female, age 91, right hemisphere 5.8
Hippocampus, CA1
nTPM: 8.0
2749 Male, age 80, left hemisphere 9.5
2045 Male, age 76, both hemispheres 9.2
1873 Female, age 85, both hemispheres 8.6
2527 Male, age 74, both hemispheres 8.5
2082 Female, age 91, right hemisphere 4.1
Hippocampus, CA2
nTPM: 8.4
1892 Male, age 76, both hemispheres 11.1
2437 Female, age 94, left hemisphere 10.7
1963 Male, age 80, left hemisphere 10.5
1940 Female, age 85, left hemisphere 6.7
2249 Male, age 74, both hemispheres 6.0
2113 Female, age 91, right hemisphere 5.4
Hippocampus, CA3
nTPM: 8.1
1867 Male, age 76, both hemispheres 10.8
2620 Female, age 94, left hemisphere 9.1
2861 Female, age 67, both hemispheres 8.7
2137 Male, age 80, left hemisphere 7.9
1891 Female, age 85, both hemispheres 6.9
2436 Male, age 74, both hemispheres 5.5
Parahippocampal cortex
nTPM: 9.5
2532 Female, age 72, left hemisphere 12.7
2018 Male, age 76, both hemispheres 11.7
1850 Male, age 80, both hemispheres 11.4
2622 Female, age 67, right hemisphere 10.1
1933 Female, age 85, both hemispheres 9.2
1990 Female, age 91, right hemisphere 8.5
2245 Female, age 91, both hemispheres 8.5
2250 Female, age 67, right hemisphere 7.8
2692 Male, age 74, both hemispheres 7.7
2693 Female, age 94, both hemispheres 7.3
Perirhinal gyrus
nTPM: 9.6
2521 Female, age 94, right hemisphere 10.9
1841 Female, age 85, right hemisphere 10.2
1847 Female, age 91, left hemisphere 9.4
1794 Male, age 80, right hemisphere 9.3
2848 Male, age 76, right hemisphere 8.0
Subiculum
nTPM: 7.5
2438 Female, age 94, left hemisphere 9.9
1977 Female, age 85, both hemispheres 9.4
1901 Male, age 80, both hemispheres 8.3
2619 Male, age 74, both hemispheres 7.0
2042 Male, age 76, both hemispheres 6.2
2729 Female, age 91, right hemisphere 4.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.2
Samples: 197

Max nTPM: 44.5
Min nTPM: 8.1
Std nTPM: 4.1
Median nTPM: 13.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 44.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 37.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 30.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 24.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 21.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 21.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 21.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 21.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 20.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 20.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.9
FF:10153-102I9 76 years, female 31.1
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 13.7
Min nTPM: 12.1
Sample A Male 12.9
Sample B Male 13.7
Sample C Female 12.1
Sample D Female 13.7
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.1
Sample A Male 13.1
Sample B Male 10.1
Sample C Female 13.7
Sample D Female 12.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70946197 Antisense, RP_050414_04_C07, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.