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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:30.5 nTPM
HPA:30.5 nTPM
GTEx:24.5 nTPM
FANTOM5:31.6 Scaled Tags Per Million
Pig:42.2 nTPM
Mouse:50.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038773
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.5
Sample id Sample description nTPM
Hippocampus
nTPM: 28.9
1898 Male, age 80, left hemisphere 32.1
2529 Female, age 94, left hemisphere 28.7
2621 Female, age 67, right hemisphere 28.7
2148 Female, age 91, left hemisphere 28.5
1855 Male, age 76, left hemisphere 27.9
1911 Female, age 85, right hemisphere 27.6
Dentate gyrus
nTPM: 28.2
1927 Female, age 91, both hemispheres 29.8
2530 Female, age 94, left hemisphere 28.2
2010 Male, age 76, both hemispheres 28.1
2246 Female, age 85, both hemispheres 28.1
2528 Male, age 74, both hemispheres 28.0
2531 Female, age 67, both hemispheres 27.1
Entorhinal gyrus
nTPM: 28.2
1938 Female, age 85, left hemisphere 30.0
2764 Male, age 80, right hemisphere 28.7
2686 Male, age 75, right hemisphere 28.3
2117 Female, age 91, right hemisphere 28.1
1787 Male, age 76, left hemisphere 27.5
2613 Female, age 94, left hemisphere 26.2
Hippocampus, CA1
nTPM: 29.6
2749 Male, age 80, left hemisphere 33.1
2527 Male, age 74, both hemispheres 32.0
1873 Female, age 85, both hemispheres 28.9
2082 Female, age 91, right hemisphere 27.8
2045 Male, age 76, both hemispheres 26.4
Hippocampus, CA2
nTPM: 29.7
1892 Male, age 76, both hemispheres 31.6
2249 Male, age 74, both hemispheres 30.5
1963 Male, age 80, left hemisphere 30.4
2437 Female, age 94, left hemisphere 29.1
1940 Female, age 85, left hemisphere 28.4
2113 Female, age 91, right hemisphere 27.9
Hippocampus, CA3
nTPM: 29.0
2137 Male, age 80, left hemisphere 31.7
1867 Male, age 76, both hemispheres 30.4
2436 Male, age 74, both hemispheres 29.8
1891 Female, age 85, both hemispheres 28.3
2861 Female, age 67, both hemispheres 26.9
2620 Female, age 94, left hemisphere 26.7
Parahippocampal cortex
nTPM: 29.4
1850 Male, age 80, both hemispheres 32.4
2245 Female, age 91, both hemispheres 31.2
1990 Female, age 91, right hemisphere 29.7
2692 Male, age 74, both hemispheres 29.6
1933 Female, age 85, both hemispheres 29.4
2250 Female, age 67, right hemisphere 29.2
2693 Female, age 94, both hemispheres 28.7
2532 Female, age 72, left hemisphere 28.4
2018 Male, age 76, both hemispheres 27.7
2622 Female, age 67, right hemisphere 27.2
Perirhinal gyrus
nTPM: 30.5
1847 Female, age 91, left hemisphere 33.1
1794 Male, age 80, right hemisphere 31.0
1841 Female, age 85, right hemisphere 30.3
2521 Female, age 94, right hemisphere 29.1
2848 Male, age 76, right hemisphere 28.9
Subiculum
nTPM: 29.1
1901 Male, age 80, both hemispheres 30.6
2438 Female, age 94, left hemisphere 29.8
1977 Female, age 85, both hemispheres 29.5
2619 Male, age 74, both hemispheres 29.5
2042 Male, age 76, both hemispheres 27.7
2729 Female, age 91, right hemisphere 27.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.5
Samples: 197

Max nTPM: 63.9
Min nTPM: 6.6
Std nTPM: 8.2
Median nTPM: 23.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 45.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 44.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 44.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 43.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 41.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 40.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 40.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 39.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 39.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.6
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 26.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.2
Samples: 4

Max nTPM: 63.6
Min nTPM: 21.1
Sample A Female 63.6
Sample B Female 40.1
Sample C Male 43.9
Sample D Male 21.1
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 31.6
Min nTPM: 18.1
Sample A Female 20.7
Sample B Female 31.6
Sample C Male 21.4
Sample D Male 18.1
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 29.9
Min nTPM: 19.0
Sample A Female 29.9
Sample B Female 24.4
Sample C Male 19.0
Sample D Male 20.8
Ventral hippocampus
nTPM: 33.0
Samples: 4

Max nTPM: 42.3
Min nTPM: 27.8
Sample A Female 42.3
Sample B Female 27.8
Sample C Male 28.1
Sample D Male 33.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.3
Samples: 4

Max nTPM: 51.3
Min nTPM: 44.7
Sample A Male 47.0
Sample B Male 50.0
Sample C Female 51.3
Sample D Female 44.7
Hippocampal formation
nTPM: 50.1
Samples: 4

Max nTPM: 54.2
Min nTPM: 47.6
Sample A Male 54.2
Sample B Male 47.6
Sample C Female 47.8
Sample D Female 50.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
512531 Antisense, RP_040809_02_B03, Mouse strain C57BL/6J (56 days, male) 0.5

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