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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:69.7 nTPM
HPA:69.7 nTPM
GTEx:61.6 nTPM
FANTOM5:76.6 Scaled Tags Per Million
Pig:57.9 nTPM
Mouse:128.4 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036434Antibody CAB020804
Glial cells Not detectedMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.7
Sample id Sample description nTPM
Hippocampus
nTPM: 63.8
1898 Male, age 80, left hemisphere 68.8
1855 Male, age 76, left hemisphere 67.9
2621 Female, age 67, right hemisphere 63.0
1911 Female, age 85, right hemisphere 61.7
2529 Female, age 94, left hemisphere 61.5
2148 Female, age 91, left hemisphere 59.9
Dentate gyrus
nTPM: 63.9
2010 Male, age 76, both hemispheres 70.9
2246 Female, age 85, both hemispheres 69.9
1927 Female, age 91, both hemispheres 64.1
2530 Female, age 94, left hemisphere 60.5
2531 Female, age 67, both hemispheres 59.4
2528 Male, age 74, both hemispheres 58.4
Entorhinal gyrus
nTPM: 53.4
2117 Female, age 91, right hemisphere 59.7
2764 Male, age 80, right hemisphere 55.2
1938 Female, age 85, left hemisphere 54.4
1787 Male, age 76, left hemisphere 54.3
2686 Male, age 75, right hemisphere 49.6
2613 Female, age 94, left hemisphere 47.3
Hippocampus, CA1
nTPM: 69.7
2749 Male, age 80, left hemisphere 84.6
2045 Male, age 76, both hemispheres 73.7
1873 Female, age 85, both hemispheres 69.7
2082 Female, age 91, right hemisphere 60.4
2527 Male, age 74, both hemispheres 59.9
Hippocampus, CA2
nTPM: 61.5
1892 Male, age 76, both hemispheres 70.0
1963 Male, age 80, left hemisphere 66.9
2249 Male, age 74, both hemispheres 61.0
1940 Female, age 85, left hemisphere 58.5
2113 Female, age 91, right hemisphere 57.9
2437 Female, age 94, left hemisphere 54.8
Hippocampus, CA3
nTPM: 67.0
2137 Male, age 80, left hemisphere 75.9
1867 Male, age 76, both hemispheres 72.9
2620 Female, age 94, left hemisphere 69.9
2436 Male, age 74, both hemispheres 68.0
1891 Female, age 85, both hemispheres 60.0
2861 Female, age 67, both hemispheres 55.0
Parahippocampal cortex
nTPM: 53.6
2018 Male, age 76, both hemispheres 61.8
1933 Female, age 85, both hemispheres 56.3
2250 Female, age 67, right hemisphere 56.1
2245 Female, age 91, both hemispheres 55.9
1850 Male, age 80, both hemispheres 55.8
2532 Female, age 72, left hemisphere 52.9
1990 Female, age 91, right hemisphere 51.9
2693 Female, age 94, both hemispheres 50.3
2692 Male, age 74, both hemispheres 48.8
2622 Female, age 67, right hemisphere 45.9
Perirhinal gyrus
nTPM: 55.1
2521 Female, age 94, right hemisphere 56.2
1847 Female, age 91, left hemisphere 56.1
1794 Male, age 80, right hemisphere 55.4
1841 Female, age 85, right hemisphere 54.6
2848 Male, age 76, right hemisphere 53.4
Subiculum
nTPM: 59.7
2042 Male, age 76, both hemispheres 68.5
1901 Male, age 80, both hemispheres 62.4
1977 Female, age 85, both hemispheres 61.8
2729 Female, age 91, right hemisphere 59.9
2619 Male, age 74, both hemispheres 55.4
2438 Female, age 94, left hemisphere 50.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.6
Samples: 197

Max nTPM: 115.8
Min nTPM: 36.7
Std nTPM: 15.8
Median nTPM: 58.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 115.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 111.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 108.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 102.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 99.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 99.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 96.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 92.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 91.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 90.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 90.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.6
FF:10169-103B7 60 years, female 89.9
FF:10153-102I9 76 years, female 63.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.9
Samples: 4

Max nTPM: 75.0
Min nTPM: 40.9
Sample A Female 75.0
Sample B Female 62.8
Sample C Male 52.9
Sample D Male 40.9
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 37.0
Min nTPM: 28.9
Sample A Female 34.4
Sample B Female 31.2
Sample C Male 37.0
Sample D Male 28.9
Subiculum
nTPM: 44.8
Samples: 4

Max nTPM: 52.5
Min nTPM: 38.2
Sample A Female 52.5
Sample B Female 40.2
Sample C Male 48.2
Sample D Male 38.2
Ventral hippocampus
nTPM: 55.1
Samples: 4

Max nTPM: 67.2
Min nTPM: 36.4
Sample A Female 51.4
Sample B Female 36.4
Sample C Male 67.2
Sample D Male 65.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 128.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 106.3
Samples: 4

Max nTPM: 114.6
Min nTPM: 97.1
Sample A Male 101.8
Sample B Male 97.1
Sample C Female 111.8
Sample D Female 114.6
Hippocampal formation
nTPM: 128.4
Samples: 4

Max nTPM: 137.3
Min nTPM: 121.9
Sample A Male 122.6
Sample B Male 131.8
Sample C Female 137.3
Sample D Female 121.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
75198154 Antisense, RP_060502_02_A10, Mouse strain C57BL/6J (56 days, male) 9.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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