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CPSF1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.9 nTPM
HPA:15.9 nTPM
GTEx:40.2 nTPM
FANTOM5:26.3 Scaled Tags Per Million
Pig:24.9 nTPM
Mouse:15.3 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
2148 Female, age 91, left hemisphere 15.9
2529 Female, age 94, left hemisphere 15.4
2621 Female, age 67, right hemisphere 15.4
1898 Male, age 80, left hemisphere 14.7
1911 Female, age 85, right hemisphere 14.7
1855 Male, age 76, left hemisphere 14.3
Dentate gyrus
nTPM: 15.4
2531 Female, age 67, both hemispheres 17.2
1927 Female, age 91, both hemispheres 15.4
2528 Male, age 74, both hemispheres 15.4
2530 Female, age 94, left hemisphere 15.4
2246 Female, age 85, both hemispheres 14.8
2010 Male, age 76, both hemispheres 14.1
Entorhinal gyrus
nTPM: 15.9
2613 Female, age 94, left hemisphere 17.1
2764 Male, age 80, right hemisphere 16.8
2686 Male, age 75, right hemisphere 15.9
1787 Male, age 76, left hemisphere 15.6
2117 Female, age 91, right hemisphere 15.2
1938 Female, age 85, left hemisphere 14.7
Hippocampus, CA1
nTPM: 15.1
2082 Female, age 91, right hemisphere 16.3
2527 Male, age 74, both hemispheres 15.2
2045 Male, age 76, both hemispheres 14.8
2749 Male, age 80, left hemisphere 14.7
1873 Female, age 85, both hemispheres 14.4
Hippocampus, CA2
nTPM: 15.4
2437 Female, age 94, left hemisphere 16.3
2113 Female, age 91, right hemisphere 15.7
1940 Female, age 85, left hemisphere 15.3
1892 Male, age 76, both hemispheres 15.1
2249 Male, age 74, both hemispheres 15.1
1963 Male, age 80, left hemisphere 14.9
Hippocampus, CA3
nTPM: 15.4
2620 Female, age 94, left hemisphere 17.2
2861 Female, age 67, both hemispheres 16.1
2436 Male, age 74, both hemispheres 15.0
2137 Male, age 80, left hemisphere 14.7
1867 Male, age 76, both hemispheres 14.6
1891 Female, age 85, both hemispheres 14.5
Parahippocampal cortex
nTPM: 15.6
2622 Female, age 67, right hemisphere 16.9
2245 Female, age 91, both hemispheres 16.4
1990 Female, age 91, right hemisphere 16.1
2693 Female, age 94, both hemispheres 15.9
2532 Female, age 72, left hemisphere 15.5
1850 Male, age 80, both hemispheres 15.3
2692 Male, age 74, both hemispheres 15.2
2250 Female, age 67, right hemisphere 15.1
1933 Female, age 85, both hemispheres 14.8
2018 Male, age 76, both hemispheres 14.7
Perirhinal gyrus
nTPM: 15.7
1794 Male, age 80, right hemisphere 16.2
2848 Male, age 76, right hemisphere 16.1
1847 Female, age 91, left hemisphere 15.7
2521 Female, age 94, right hemisphere 15.5
1841 Female, age 85, right hemisphere 15.3
Subiculum
nTPM: 15.0
2729 Female, age 91, right hemisphere 15.5
2619 Male, age 74, both hemispheres 15.4
2438 Female, age 94, left hemisphere 15.0
1901 Male, age 80, both hemispheres 14.9
1977 Female, age 85, both hemispheres 14.9
2042 Male, age 76, both hemispheres 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.2
Samples: 197

Max nTPM: 114.2
Min nTPM: 12.6
Std nTPM: 16.8
Median nTPM: 36.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 114.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 90.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 83.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 80.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 77.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 76.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 76.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 75.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 75.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 74.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 73.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.3
FF:10153-102I9 76 years, female 31.8
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 29.5
Min nTPM: 18.3
Sample A Female 29.5
Sample B Female 24.9
Sample C Male 21.8
Sample D Male 18.3
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 15.8
Sample A Female 20.7
Sample B Female 20.6
Sample C Male 20.3
Sample D Male 15.8
Subiculum
nTPM: 21.2
Samples: 4

Max nTPM: 24.8
Min nTPM: 18.7
Sample A Female 24.8
Sample B Female 20.8
Sample C Male 20.3
Sample D Male 18.7
Ventral hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 31.9
Min nTPM: 18.3
Sample A Female 22.3
Sample B Female 18.3
Sample C Male 31.9
Sample D Male 27.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.0
Sample A Male 13.0
Sample B Male 15.3
Sample C Female 15.0
Sample D Female 17.8
Hippocampal formation
nTPM: 12.6
Samples: 4

Max nTPM: 15.0
Min nTPM: 8.5
Sample A Male 13.4
Sample B Male 13.6
Sample C Female 8.5
Sample D Female 15.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
69608028 Antisense, RP_050426_03_D03, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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