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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.8 nTPM
HPA:17.8 nTPM
GTEx:22.4 nTPM
FANTOM5:24.7 Scaled Tags Per Million
Pig:11.6 nTPM
Mouse:24.0 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.3
2529 Female, age 94, left hemisphere 17.7
1911 Female, age 85, right hemisphere 16.6
2621 Female, age 67, right hemisphere 16.6
1898 Male, age 80, left hemisphere 16.2
2148 Female, age 91, left hemisphere 15.8
1855 Male, age 76, left hemisphere 15.2
Dentate gyrus
nTPM: 16.9
2528 Male, age 74, both hemispheres 18.0
2010 Male, age 76, both hemispheres 17.6
2530 Female, age 94, left hemisphere 17.2
2531 Female, age 67, both hemispheres 16.4
2246 Female, age 85, both hemispheres 16.0
1927 Female, age 91, both hemispheres 15.9
Entorhinal gyrus
nTPM: 17.8
2764 Male, age 80, right hemisphere 20.0
2117 Female, age 91, right hemisphere 19.2
1787 Male, age 76, left hemisphere 17.8
1938 Female, age 85, left hemisphere 17.5
2613 Female, age 94, left hemisphere 16.9
2686 Male, age 75, right hemisphere 15.6
Hippocampus, CA1
nTPM: 16.7
2749 Male, age 80, left hemisphere 18.8
2527 Male, age 74, both hemispheres 17.0
2082 Female, age 91, right hemisphere 16.9
1873 Female, age 85, both hemispheres 16.2
2045 Male, age 76, both hemispheres 14.8
Hippocampus, CA2
nTPM: 17.1
2249 Male, age 74, both hemispheres 18.5
1940 Female, age 85, left hemisphere 17.1
1963 Male, age 80, left hemisphere 17.1
2437 Female, age 94, left hemisphere 17.1
2113 Female, age 91, right hemisphere 16.8
1892 Male, age 76, both hemispheres 15.9
Hippocampus, CA3
nTPM: 16.4
2137 Male, age 80, left hemisphere 17.1
2620 Female, age 94, left hemisphere 17.1
2436 Male, age 74, both hemispheres 16.7
1891 Female, age 85, both hemispheres 16.5
1867 Male, age 76, both hemispheres 16.3
2861 Female, age 67, both hemispheres 14.5
Parahippocampal cortex
nTPM: 16.6
1990 Female, age 91, right hemisphere 18.5
1850 Male, age 80, both hemispheres 17.0
2245 Female, age 91, both hemispheres 17.0
2532 Female, age 72, left hemisphere 17.0
2018 Male, age 76, both hemispheres 16.9
2250 Female, age 67, right hemisphere 16.8
1933 Female, age 85, both hemispheres 16.5
2693 Female, age 94, both hemispheres 15.7
2692 Male, age 74, both hemispheres 15.3
2622 Female, age 67, right hemisphere 15.1
Perirhinal gyrus
nTPM: 17.6
1794 Male, age 80, right hemisphere 19.1
1847 Female, age 91, left hemisphere 17.7
2521 Female, age 94, right hemisphere 17.7
1841 Female, age 85, right hemisphere 17.1
2848 Male, age 76, right hemisphere 16.4
Subiculum
nTPM: 17.1
1977 Female, age 85, both hemispheres 19.2
1901 Male, age 80, both hemispheres 17.6
2619 Male, age 74, both hemispheres 17.4
2042 Male, age 76, both hemispheres 16.9
2438 Female, age 94, left hemisphere 15.7
2729 Female, age 91, right hemisphere 15.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 42.7
Min nTPM: 11.8
Std nTPM: 4.0
Median nTPM: 22.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 40.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 36.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 33.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 31.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 30.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 30.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 29.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 29.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 28.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.7
FF:10153-102I9 76 years, female 31.6
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 14.8
Min nTPM: 8.7
Sample A Female 14.8
Sample B Female 11.6
Sample C Male 11.3
Sample D Male 8.7
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.7
Sample A Female 9.9
Sample B Female 9.6
Sample C Male 9.5
Sample D Male 7.7
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 12.4
Min nTPM: 8.2
Sample A Female 12.4
Sample B Female 9.5
Sample C Male 9.2
Sample D Male 8.2
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.0
Sample A Female 11.0
Sample B Female 8.0
Sample C Male 13.5
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 22.5
Min nTPM: 21.9
Sample A Male 22.1
Sample B Male 21.9
Sample C Female 22.1
Sample D Female 22.5
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 25.2
Min nTPM: 22.4
Sample A Male 23.5
Sample B Male 22.4
Sample C Female 25.0
Sample D Female 25.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
69080055 Antisense, RP_050324_01_G06, Mouse strain C57BL/6J (56 days, male) 8.0

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The Human Protein Atlas

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