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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.6 nTPM
HPA:12.6 nTPM
GTEx:12.7 nTPM
FANTOM5:41.9 Scaled Tags Per Million
Pig:1.2 nTPM
Mouse:2.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031976Antibody CAB032500Antibody CAB037291
Glial cells MediumNot detectedLow
Neuronal cells MediumLowLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.6
Sample id Sample description nTPM
Hippocampus
nTPM: 12.1
2529 Female, age 94, left hemisphere 13.2
2621 Female, age 67, right hemisphere 12.6
1911 Female, age 85, right hemisphere 12.1
1855 Male, age 76, left hemisphere 11.7
2148 Female, age 91, left hemisphere 11.7
1898 Male, age 80, left hemisphere 11.2
Dentate gyrus
nTPM: 12.0
2530 Female, age 94, left hemisphere 15.0
2531 Female, age 67, both hemispheres 12.1
1927 Female, age 91, both hemispheres 11.6
2246 Female, age 85, both hemispheres 11.6
2528 Male, age 74, both hemispheres 11.2
2010 Male, age 76, both hemispheres 10.5
Entorhinal gyrus
nTPM: 11.3
1938 Female, age 85, left hemisphere 11.9
2686 Male, age 75, right hemisphere 11.6
2117 Female, age 91, right hemisphere 11.5
2613 Female, age 94, left hemisphere 11.4
2764 Male, age 80, right hemisphere 10.7
1787 Male, age 76, left hemisphere 10.5
Hippocampus, CA1
nTPM: 11.0
2527 Male, age 74, both hemispheres 11.9
2082 Female, age 91, right hemisphere 11.2
1873 Female, age 85, both hemispheres 11.0
2045 Male, age 76, both hemispheres 10.6
2749 Male, age 80, left hemisphere 10.4
Hippocampus, CA2
nTPM: 11.7
2437 Female, age 94, left hemisphere 13.0
1963 Male, age 80, left hemisphere 11.9
1940 Female, age 85, left hemisphere 11.8
2113 Female, age 91, right hemisphere 11.7
2249 Male, age 74, both hemispheres 11.0
1892 Male, age 76, both hemispheres 10.9
Hippocampus, CA3
nTPM: 12.6
2861 Female, age 67, both hemispheres 15.4
2620 Female, age 94, left hemisphere 12.9
1891 Female, age 85, both hemispheres 12.5
2137 Male, age 80, left hemisphere 12.1
1867 Male, age 76, both hemispheres 11.6
2436 Male, age 74, both hemispheres 11.3
Parahippocampal cortex
nTPM: 11.6
2622 Female, age 67, right hemisphere 12.5
2532 Female, age 72, left hemisphere 12.1
2692 Male, age 74, both hemispheres 12.1
1990 Female, age 91, right hemisphere 11.9
2245 Female, age 91, both hemispheres 11.9
2693 Female, age 94, both hemispheres 11.7
1850 Male, age 80, both hemispheres 11.5
1933 Female, age 85, both hemispheres 11.2
2018 Male, age 76, both hemispheres 11.0
2250 Female, age 67, right hemisphere 10.4
Perirhinal gyrus
nTPM: 11.2
2521 Female, age 94, right hemisphere 12.1
1841 Female, age 85, right hemisphere 11.7
1847 Female, age 91, left hemisphere 11.0
2848 Male, age 76, right hemisphere 10.6
1794 Male, age 80, right hemisphere 10.5
Subiculum
nTPM: 11.6
2619 Male, age 74, both hemispheres 12.3
1901 Male, age 80, both hemispheres 11.7
1977 Female, age 85, both hemispheres 11.7
2729 Female, age 91, right hemisphere 11.6
2438 Female, age 94, left hemisphere 11.5
2042 Male, age 76, both hemispheres 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.7
Samples: 197

Max nTPM: 66.3
Min nTPM: 1.1
Std nTPM: 13.3
Median nTPM: 7.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 66.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 65.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 65.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 57.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 57.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 54.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 53.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 49.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 44.7
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 43.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 43.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.9
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 12.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.8
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.6
Sample A Female 0.6
Sample B Female 0.8
Sample C Male 1.2
Sample D Male 0.6
Entorhinal cortex
nTPM: 1.3
Samples: 4

Max nTPM: 1.7
Min nTPM: 0.8
Sample A Female 1.0
Sample B Female 1.5
Sample C Male 1.7
Sample D Male 0.8
Subiculum
nTPM: 0.9
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.6
Sample A Female 0.9
Sample B Female 0.6
Sample C Male 0.9
Sample D Male 1.3
Ventral hippocampus
nTPM: 1.2
Samples: 4

Max nTPM: 2.1
Min nTPM: 0.6
Sample A Female 0.6
Sample B Female 1.0
Sample C Male 2.1
Sample D Male 0.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.7
Min nTPM: 1.9
Sample A Male 2.7
Sample B Male 1.9
Sample C Female 3.7
Sample D Female 2.9
Hippocampal formation
nTPM: 2.0
Samples: 4

Max nTPM: 3.0
Min nTPM: 1.4
Sample A Male 1.4
Sample B Male 1.9
Sample C Female 1.6
Sample D Female 3.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763759 Antisense, RP_050921_02_F03, Mouse strain C57BL/6J (56 days, male) 0.0

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