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CLDND1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:483.5 nTPM
HPA:483.5 nTPM
GTEx:502.7 nTPM
FANTOM5:343.4 Scaled Tags Per Million
Pig:59.9 nTPM
Mouse:90.5 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029841
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 483.5
Sample id Sample description nTPM
Hippocampus
nTPM: 411.4
1911 Female, age 85, right hemisphere 436.2
2529 Female, age 94, left hemisphere 430.5
1898 Male, age 80, left hemisphere 415.4
2621 Female, age 67, right hemisphere 414.6
1855 Male, age 76, left hemisphere 389.2
2148 Female, age 91, left hemisphere 382.3
Dentate gyrus
nTPM: 416.3
2530 Female, age 94, left hemisphere 506.2
2528 Male, age 74, both hemispheres 435.1
2010 Male, age 76, both hemispheres 427.8
2246 Female, age 85, both hemispheres 385.0
2531 Female, age 67, both hemispheres 380.6
1927 Female, age 91, both hemispheres 362.9
Entorhinal gyrus
nTPM: 435.9
2117 Female, age 91, right hemisphere 515.1
2764 Male, age 80, right hemisphere 470.2
2686 Male, age 75, right hemisphere 431.7
1938 Female, age 85, left hemisphere 417.4
2613 Female, age 94, left hemisphere 392.9
1787 Male, age 76, left hemisphere 387.9
Hippocampus, CA1
nTPM: 382.1
2527 Male, age 74, both hemispheres 412.5
1873 Female, age 85, both hemispheres 399.1
2082 Female, age 91, right hemisphere 394.7
2749 Male, age 80, left hemisphere 374.5
2045 Male, age 76, both hemispheres 329.6
Hippocampus, CA2
nTPM: 425.9
1963 Male, age 80, left hemisphere 480.9
2249 Male, age 74, both hemispheres 458.5
2437 Female, age 94, left hemisphere 430.7
2113 Female, age 91, right hemisphere 410.1
1940 Female, age 85, left hemisphere 405.0
1892 Male, age 76, both hemispheres 370.3
Hippocampus, CA3
nTPM: 380.1
1891 Female, age 85, both hemispheres 491.3
1867 Male, age 76, both hemispheres 393.4
2436 Male, age 74, both hemispheres 386.1
2137 Male, age 80, left hemisphere 345.8
2861 Female, age 67, both hemispheres 332.9
2620 Female, age 94, left hemisphere 331.1
Parahippocampal cortex
nTPM: 403.9
2532 Female, age 72, left hemisphere 461.0
2692 Male, age 74, both hemispheres 460.3
1990 Female, age 91, right hemisphere 432.5
1850 Male, age 80, both hemispheres 420.4
2018 Male, age 76, both hemispheres 407.0
1933 Female, age 85, both hemispheres 406.2
2245 Female, age 91, both hemispheres 390.7
2693 Female, age 94, both hemispheres 367.6
2250 Female, age 67, right hemisphere 358.5
2622 Female, age 67, right hemisphere 334.9
Perirhinal gyrus
nTPM: 368.5
2848 Male, age 76, right hemisphere 375.4
1794 Male, age 80, right hemisphere 369.5
1841 Female, age 85, right hemisphere 366.6
1847 Female, age 91, left hemisphere 365.7
2521 Female, age 94, right hemisphere 365.3
Subiculum
nTPM: 483.5
2042 Male, age 76, both hemispheres 560.8
1901 Male, age 80, both hemispheres 532.3
1977 Female, age 85, both hemispheres 493.0
2438 Female, age 94, left hemisphere 467.3
2619 Male, age 74, both hemispheres 433.6
2729 Female, age 91, right hemisphere 414.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 502.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 502.7
Samples: 197

Max nTPM: 1797.1
Min nTPM: 82.9
Std nTPM: 310.9
Median nTPM: 428.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1797.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1485.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 1429.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1381.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1371.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1262.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 1219.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1216.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 1176.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 1173.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 1133.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 343.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 343.4
FF:10153-102I9 76 years, female 416.9
FF:10169-103B7 60 years, female 269.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.0
Samples: 4

Max nTPM: 83.5
Min nTPM: 33.3
Sample A Female 83.5
Sample B Female 49.4
Sample C Male 73.6
Sample D Male 33.3
Entorhinal cortex
nTPM: 42.5
Samples: 4

Max nTPM: 50.6
Min nTPM: 38.0
Sample A Female 40.9
Sample B Female 50.6
Sample C Male 40.5
Sample D Male 38.0
Subiculum
nTPM: 41.3
Samples: 4

Max nTPM: 48.5
Min nTPM: 33.5
Sample A Female 48.5
Sample B Female 40.5
Sample C Male 33.5
Sample D Male 42.5
Ventral hippocampus
nTPM: 46.0
Samples: 4

Max nTPM: 57.9
Min nTPM: 36.4
Sample A Female 57.9
Sample B Female 36.4
Sample C Male 41.3
Sample D Male 48.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.5
Samples: 4

Max nTPM: 96.3
Min nTPM: 81.6
Sample A Male 96.3
Sample B Male 91.3
Sample C Female 92.8
Sample D Female 81.6
Hippocampal formation
nTPM: 84.3
Samples: 4

Max nTPM: 93.0
Min nTPM: 80.2
Sample A Male 93.0
Sample B Male 80.2
Sample C Female 81.7
Sample D Female 82.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
71656904 Antisense, RP_050927_04_E05, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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